Original MediaWiki page

How do I edit this website?
the Fiji distribution of ImageJThis page describes content relating to the Fiji distribution of ImageJ. Click the logo for details.

TopoJ

The content of this page has not been vetted since shifting away from MediaWiki. If you’d like to help, check out the how to help guide!

The TopoJ plugins help you analyze surfaces of bright objects in image stacks. You can load an example via FileOpen SamplesSinteredAlumina (2.6MB):

Topoj sintered alumina

Compute Topography

To compute the Topography, call AnalyzeTopoJCompute Topography:

Topoj dialog

The result looks like this:

Topoj computed topography

Remove Slope

To remove the overall slope of the surface, click on the AnalyzeTopoJRemove Slope menu item:

Topoj remove slope