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OMEVisual

Name

OMEVisual

Software

Fiji

Author

Hadrien Mary

Maintainer

Hadrien Mary

Source

on GitHub

Status

v1.0.1, stable

Category


Presentation

OMEVisual is a Fiji plugin to easily visualize OME metadata.

Usage:

  • Open your image in Fiji.
  • Start the plugin with PluginsUtilitiesVisualize OME Metadata .
  • A window should open with the metadata in it.

Please note that :

  • This goal of this plugin is not to implement all the OME features.
  • This plugin makes several strong assumptions about the OME model in order to simplify the interface :
    • Each image contains only one Pixels element.
    • Each TiffData contains only one Plane.
    • Plane and TiffData informations are displayed at the same location without distinction.
  • Any ideas to improve the visualization and/or add OME features is very welcome :
    • The best way is to submit a PR.
    • You can also open an issue and post an OME-TIFF file which contains additional OME features you would like to see added to the plugin.
caption OMEVisual Screenshot
  • Source code on GitHub : https://github.com/fiji/OMEVisual

Authors

OMEVisual has been created by Hadrien Mary.

This work started in 2016 at the Gary Brouhard laboratory at the University of McGill.