This is a repository (update site) containing custom plugins and scripts created at the IMCF / Uni Basel, as well as some collected ImageJ plugins we are using that are not (yet) included in Fiji.
Instructions
To add the repository to your list of FiJi update sites, use this address:
Please see how to follow a 3rd party update site for detailed instructions how to enable an additional update site in your Fiji installation.
PLEASE NOTE: you also need to enable the “IBMP-CNRS” update site that is already configured in Fiji (it’s just not active by default). Otherwise the ActionBars won’t work.
Description
Macros and Plugins in the IMCF repository
Auto Run
Our custom auto run macros.
location: macros/AutoRun/
Action Bars
Our shortcut toolbars, requires the Action Bar plugin.
location: jars/imcf-fiji-toolbars-*.jar
IMCF Tools
Custom macros and scripts for users of our facility.
location: jars/imcf-fiji-scripts-*.jar
JaCoP
“Just another Coloc Plugin”: a compilation of co-localization tools.
location: plugins/jacop_.jar
For more information about the IMCF please have a look at our website:
Imaging Core Facility of the Biozentrum, University of Basel, Switzerland.
