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StereoMate

Name

StereoMate

Software

FIJI

Author

Steven J. West

Maintainer

Steven J. West

File Stereo\_Mate.jar
Source

https://github.com/stevenjwest/StereoMate

Status

stable


Purpose

This plugin suite provides tools for the processing and analysis of confocal image stacks. It aims to allow the stereological and automated analysis of 3D reconstructed objects from regions of interest.

Documentation

This plugin provides the image processing and analysis functionality described in the following paper

West S-J., Bennett D-H-L., “StereoMate: A Stereological and Automated Analysis Platform for Assessing Histological Labelling in Cleared Tissue Specimens”, bioRxiv doi:https://doi.org/10.1101/648337.