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SNT › Tubular Geodesics

The Tubular Geodesics plugins were developed several years ago¹ for Simple Neurite Tracer but remain functional in modern SNT. They can be installed manually as an SNT add-on. Once installed, they allow you to trace on a filtered-version of your image in which neuronal processes (or other tubular structures) are significantly enhanced using ITK segmentation. More details on the following pages:

References

doi:10.1109/cvpr.2012.6247722 ↩

ImageJ Docs

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SNT › Tubular Geodesics

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