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3D ImageJ Suite

This suite provides plugins to enhance 3D capabilities of ImageJ. Updated content will be available in Framagit.


The pdf of the NEUBIAS academy presentation “Introduction to 3D Analysis with 3D ImageJ suite” is available: NEUBIAS_3DSuite.pdf.

The QAs are available on the forum.

The associated project for automation is available in TAPAS.


Thomas Boudier , Sorbonne University, Paris, France.

With many contributions from J. Ollion, Laboratoire Jean Perrin, Paris, France.


If you use the 3D suite for your publication please cite:



GPL distribution (see license).