Benjamin Schmid, Mark Longair
This plugin will threshold a stack and create a surface using marchingcubes, and then save that as a Wavefront .OBJ file.
There is an option to export surfaces in this format from the 3D Viewer but this option may still be useful for you in the following situations:
- If the 3D Viewer doesn’t work for you (or is very slow)
- If you are using Fiji’s –headless option