This page lists Open Source resources that complement ImageJ tools for neuronatomy, including SNT, NeuronJ, and TrakEM2.
Online Tools
| Visualization | Analysis |
|---|---|
| SharkViewer | Remod |
| MPDL SWC service | L-measure (applet) |
| HBP Morphology Viewer |
Desktop Tools
| Visualization and Analysis | Analysis |
|---|---|
| Py3DN | L-measure |
| NeuroMorph | btmorph |
| nat |
Tracing Tools
Software packages for neuronal tracing not based on ImageJ include: Neuromantic, NeuronStudio, neuTube, Vaa3D
