Welcome to EasyFiji
please check Github link for relevant info.
EasyFiji is a graphical user interface for fluorescence image display and processing in Fiji.
Download options:
- Download via Github:
- Click here to download ⬇️
- After downloading, copy the
.jarfile into your Fiji.app/plugins/ folder. - Restart Fiji.
- Download via the ImageJ Update Site:
- Launch Fiji and navigate to Help > Update.. in the menu bar.
- In the updater window, click Manage Update sites and Search for “EasyFiji” and click “Apply and Close”.
- Restart Fiji.
Quick start
- Tutorial video
- Procotol paper (To be continued).
Dependencies
EasyFiji is fully compatiable with native Fiji. EasyFiji is compatible with ImageJ but requires Bioformats and Kymograph builder plugins to be installed separately for some functions.
Sample images
Example images used in the paper Source image repo:
- Fluorescence two-channel displays
- Fluorescence grayscale(DIC) display
- Fluorescence grayscale(EM) display
- Colocalization display
- Axial bleach correction
- Temporal bleach correction
Additional Help
- For ‘how to’ questions please post to our Image.sc thread.
- For issues or feature requests, please open an issue on GitHub repository.
