Ticket #1563 (closed feature: fixed)
Opened 2012-11-05T15:13:07-06:00
Last modified 2013-06-06T15:47:10-05:00
Fix obviously failing commands [ndim-data]
| Reported by: | bdezonia | Owned by: | bdezonia |
|---|---|---|---|
| Priority: | minor | Milestone: |
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| Component: | Core | Version: | |
| Severity: | serious | Keywords: | |
| Cc: | Blocked By: | #799, #1335, #1405, #1478, #1549, #1643, #1694, #1703, #1758, #1761, #1771, #1772, #1780, #1781, #1798, #1811, #1834, #1835, #1870, #1877, #1880, #1882, #1887, #1892, #1897, #1898, #1900, #1907 | |
| Blocking: |
Description
Some commands in IJ2 fail in a very apparent fashion. They should be addressed preferentially. See blockers to this ticket.
Change History
comment:3 Changed 2012-11-21T10:18:34-06:00 by bdezonia
- Summary changed from Fix obviously failing commands (2.0.0-beta6) to Fix obviously failing commands (2.0.0-beta7)
comment:9 Changed 2012-12-06T12:50:27-06:00 by curtis
- Summary changed from Fix obviously failing commands (2.0.0-beta7) to Fix obviously failing commands [ndim-data]
comment:30 Changed 2013-04-12T13:22:30-05:00 by bdezonia
- Blocked By 1724 removed
(In #1724) With commit 2be2b78248ee90292f99acbc11b771c9fdf09159 the exception is now avoided. Pushing the rest of this ticket (the UNDO approach) to a later time.
comment:38 Changed 2013-05-08T14:35:28-05:00 by curtis
- Blocked By 1840 removed
(In #1840) I took a crack at addressing this issue, using the modeless JDialog approach discussed at SO #16175884. But doing it right (which we ultimately must do) is too involved for beta7.
comment:47 Changed 2013-05-28T16:41:59-05:00 by bdezonia
- Blocked By 1880 added
(In #1880) This issue no longer apparent on the scifio-cells branch (soon to be merged)
comment:48 Changed 2013-05-28T16:47:02-05:00 by bdezonia
- Blocked By 799 added
(In #799) The code around this has changed such that this error cannot be replicated. Closiing.
comment:61 Changed 2013-06-04T11:45:34-05:00 by bdezonia
- Blocked By 1881 removed
(In #1881) Note that scifio-cells has been merged to master.
comment:65 Changed 2013-06-05T13:09:51-05:00 by hinerm
- Blocked By 1908 removed
(In #1908) Currently, these images are opened similarly using SCIFIO as in FIJI with the Bio-Formats importer.
In both cases, they are opened as RGBA. Compositing the alpha channel makes the images look off.
IJ1 seems to be taking extra steps to process the alpha channel out, and opens this as an RGB image instead.
So we need to decide how to handle alpha channels.
Also, the color table for the 4th channel is blue in IJ2 but the Bio-Formats importer and IJ1 use white.
comment:66 Changed 2013-06-06T15:47:10-05:00 by bdezonia
- Status changed from new to closed
- Resolution set to fixed
All constituent tickets have been resolved for this beta. Closing feature.