Ticket #816 (closed defect: fixed)
Opened 2011-10-12T09:46:31-05:00
Last modified 2011-10-12T11:39:30-05:00
Crop can throw exception
| Reported by: | bdezonia | Owned by: | bdezonia |
|---|---|---|---|
| Priority: | major | Milestone: |
|
| Component: | Plugin Framework | Version: | |
| Severity: | serious | Keywords: | |
| Cc: | Blocked By: | ||
| Blocking: |
Description
Open Boats. Draw an overlay. Draw another one. No outline appears for it. Now crop. Exception thrown.
[ERROR] Module threw exception
java.lang.ArrayIndexOutOfBoundsException: 414720
at net.imglib2.img.basictypeaccess.array.ByteArray.getValue(ByteArray.java:59)
at net.imglib2.type.numeric.integer.GenericByteType.getValue(GenericByteType.java:73)
at net.imglib2.type.numeric.integer.UnsignedByteType.get(UnsignedByteType.java:117)
at net.imglib2.type.numeric.integer.UnsignedByteType.getIntegerLong(UnsignedByteType.java:123)
at net.imglib2.type.numeric.integer.AbstractIntegerType.getRealDouble(AbstractIntegerType.java:15)
at imagej.core.plugins.imglib.CropImage$CropAlgorithm.process(CropImage.java:158)
at imagej.core.plugins.imglib.ImgLibDataTransform.run(ImgLibDataTransform.java:68)
at imagej.core.plugins.imglib.CropImage.run(CropImage.java:91)
at imagej.ext.plugin.PluginModule.run(PluginModule.java:174)
at imagej.ext.module.ModuleRunner.run(ModuleRunner.java:148)
at imagej.ext.module.ModuleRunner.call(ModuleRunner.java:118)
at imagej.ext.module.ModuleRunner.call(ModuleRunner.java:1)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
at java.util.concurrent.FutureTask.run(FutureTask.java:138)
at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
at java.lang.Thread.run(Thread.java:680)
Found the exception issue. Fixed that portion of this bug in e71655f2ae27b82bb67ee79ac3d8bb5898186e39.
Note that second overlay still does not draw.
Also the overlay service returns the selected bounds as the whole of the image rather than the dimensions of the last created overlay. Need to determine correct behavior here.