sysctl says os_release is 12.5.0 Detected ImageJ2 Available RAM: 1239MB, using 3/4 of that: 930MB JRE not found in '/Users/mhiner/Desktop/ImageJ.app/jre' JAVA_HOME appears to be a JRE: '/System/Library/Frameworks/JavaVM.framework/Versions/A/Commands' Re-executing with correct library lookup path (/Users/mhiner/Desktop/ImageJ.app/lib/macosx:/Users/mhiner/Desktop/ImageJ.app/mm/macosx) sysctl says os_release is 12.5.0 Detected ImageJ2 Available RAM: 1239MB, using 3/4 of that: 930MB JRE not found in '/Users/mhiner/Desktop/ImageJ.app/jre' JAVA_HOME appears to be a JRE: '/System/Library/Frameworks/JavaVM.framework/Versions/A/Commands' JavaVM: requested Java version (1.5) not available. Using Java at "/System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home" instead. [DEBUG] Creating service: org.scijava.event.DefaultEventService [DEBUG] Creating service: org.scijava.log.StderrLogService [INFO] Created service: org.scijava.log.StderrLogService [DEBUG] [org.scijava.log.StderrLogService created in 0 ms] [DEBUG] Creating service: org.scijava.thread.DefaultThreadService [INFO] Created service: org.scijava.thread.DefaultThreadService [DEBUG] [org.scijava.thread.DefaultThreadService created in 0 ms] [INFO] Created service: org.scijava.event.DefaultEventService [DEBUG] [org.scijava.event.DefaultEventService created in 11 ms] [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService [INFO] Created service: net.imglib2.meta.units.DefaultUnitService [DEBUG] [net.imglib2.meta.units.DefaultUnitService created in 28 ms] [DEBUG] Creating service: org.scijava.app.DefaultAppService [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService [INFO] Found 497 plugins. [DEBUG] - class='imagej.plugin.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin [DEBUG] - class='imagej.plugin.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='imagej.core.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool [DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.plugin.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='imagej.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='imagej.data.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='imagej.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='io.scif.ome.xml.translation.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.xml.translation.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='imagej.plugin.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='imagej.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.tools.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.ui.swing.tools.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.data.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.legacy.app.LegacyImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App [DEBUG] - class='imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.ui.swing.tools.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.data.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.ui.swing.tools.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.ui.swing.tools.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.data.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.ui.swing.tools.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.data.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.ui.swing.tools.overlay.AngleJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.data.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=96.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.ui.swing.tools.overlay.PointJHotDrawOverlay', priority=95.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.data.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=95.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.data.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.data.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.data.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.data.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.data.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.data.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='imagej.data.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=4.0, enabled=true, pluginType=Filter [DEBUG] - class='io.scif.filters.FileStitcher', priority=3.0, enabled=true, pluginType=Filter [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=2.0, enabled=true, pluginType=Filter [DEBUG] - class='io.scif.filters.ChannelFiller', priority=1.0, enabled=true, pluginType=Filter [DEBUG] - class='imagej.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.core.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.data.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.data.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.ui.swing.commands.debug.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.app.ImageJWebsite', menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsInputOutput', menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.debug.InspectImg', menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.ui.swing.commands.debug.InspectObjects', menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.InvalidCommandDemo$InvalidCommand', menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.InvertDataValues', menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.data.lut.LUTSelectorPlugin', label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.overlay.OverlayLabels', menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsLineWidth', menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.app.ListShortcuts', menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.LogDataValues', menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.ui.swing.commands.OptionsLookAndFeel', menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsNorthwest', menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.OrDataValuesWith', menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.binary.OpenBinaryImage', menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.io.OpenFile', menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.zoom.ZoomOriginalScale', menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.interactive.OrthogonalViews', menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.ui.swing.commands.OverlayManager', menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.overlay.OverlayProperties', label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.tools.PaintBrushToolConfig', label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.ParamAssignOrder', menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.tools.PencilToolConfig', label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.object.DefaultObjectService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.plugin.DefaultPluginService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.thread.DefaultThreadService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.ome.xml.meta.OMEXMLFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.ome.xml.meta.OMEXMLFormat$OMETranslator', priority=0.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.ome.xml.services.DefaultOMEXMLMetadataService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.ome.xml.services.OMEXMLServiceImpl', priority=0.0, enabled=true, pluginType=OMEXMLService [DEBUG] - class='io.scif.ome.xml.translation.DefaultOMETranslator', priority=0.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.formats.qt.PICTFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.formats.EPSFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.TextFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.formats.JPEGFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.services.DefaultTranslatorService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.filters.ChannelFillerMetadata', priority=0.0, enabled=true, pluginType=MetadataWrapper [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.services.DefaultFilePatternService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true, pluginType=IStreamAccess [DEBUG] - class='io.scif.formats.JavaFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.formats.ICSFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.services.DefaultPluginAttributeService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.filters.DimensionSwapperMetadata', priority=0.0, enabled=true, pluginType=MetadataWrapper [DEBUG] - class='io.scif.services.DefaultLocationService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0, enabled=true, pluginType=Filter [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true, pluginType=IStreamAccess [DEBUG] - class='io.scif.formats.BMPFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess [DEBUG] - class='io.scif.formats.ZipFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.DICOMFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.PCXFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.GIFFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.formats.AVIFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.MNGFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.formats.FITSFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.formats.FakeFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.PGMFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.OBFFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.formats.MicromanagerFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true, pluginType=Codec [DEBUG] - class='io.scif.formats.APNGFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.NRRDFormat', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.DefaultMetadataService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.formats.JPEG2000Format', priority=0.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata', priority=0.0, enabled=true, pluginType=MetadataWrapper [DEBUG] - class='imagej.core.commands.app.CoreAppEventService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.core.commands.dataset.LoadDataset', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.misc.ApplyLookupTable', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.overlay.SelectedManagerOverlayProperties', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.SplitChannelsContextMonitor', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.command.console.RunArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument [DEBUG] - class='imagej.command.DefaultCommandService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.console.DefaultConsoleService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.display.DefaultDisplayService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.io.DefaultIOService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.io.DefaultRecentFileService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.menu.DefaultMenuService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.module.DefaultModuleService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.options.DefaultOptionsService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.platform.DefaultPlatformService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.script.DefaultScriptService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.script.io.ScriptIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin [DEBUG] - class='imagej.text.DefaultTextService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.tool.DefaultToolService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.widget.DefaultWidgetService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.animation.DefaultAnimationService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.autoscale.DefaultAutoscaleService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.DefaultDatasetService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.DefaultImgPlusService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.display.DefaultDatasetView', priority=0.0, enabled=true, pluginType=DataView [DEBUG] - class='imagej.data.display.DefaultImageDisplay', priority=0.0, enabled=true, pluginType=Display [DEBUG] - class='imagej.data.display.DefaultImageDisplayService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.display.DefaultInputService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.display.DefaultOverlayService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.display.DefaultOverlayView', priority=0.0, enabled=true, pluginType=DataView [DEBUG] - class='imagej.data.display.DefaultWindowService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.lut.DefaultLUTService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.lut.io.LUTIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin [DEBUG] - class='imagej.data.measure.DefaultMeasurementService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.measure.DefaultStatisticsService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.minmax.DefaultMinMaxMethod', priority=0.0, enabled=true, pluginType=MinMaxMethod [DEBUG] - class='imagej.data.operator.DefaultCalculatorService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.sampler.DefaultSamplerService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.table.DefaultTableDisplay', priority=0.0, enabled=true, pluginType=Display [DEBUG] - class='imagej.data.threshold.DefaultThresholdService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.types.DataType12BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType16BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType16BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType1BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType32BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType32BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType32BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType64BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType64BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType8BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DataType8BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType [DEBUG] - class='imagej.data.types.DefaultDataTypeService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.ui.console.OpenArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument [DEBUG] - class='imagej.ui.console.UIArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument [DEBUG] - class='imagej.ui.DefaultUIService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.ui.dnd.DefaultDragAndDropService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.ui.dnd.ListDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler [DEBUG] - class='imagej.ui.dnd.LUTFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler [DEBUG] - class='imagej.ui.dnd.ScriptFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler [DEBUG] - class='imagej.ui.ShowReadme', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.updater.core.DefaultUploaderService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.updater.core.FileUploader', priority=0.0, enabled=true, pluginType=Uploader [DEBUG] - class='imagej.legacy.DefaultLegacyService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.script.Beanshell', priority=0.0, enabled=true, pluginType=ScriptLanguage [DEBUG] - class='imagej.script.Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage [DEBUG] - class='imagej.script.java.JavaEngineFactory', priority=0.0, enabled=true, pluginType=ScriptLanguage [DEBUG] - class='imagej.script.JRuby', priority=0.0, enabled=true, pluginType=ScriptLanguage [DEBUG] - class='imagej.script.Jython', priority=0.0, enabled=true, pluginType=ScriptLanguage [DEBUG] - class='imagej.core.text.MarkdownTextFormat', priority=0.0, enabled=true, pluginType=TextFormat [DEBUG] - class='imagej.ui.common.awt.AWTRenderingService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.ui.common.awt.AWTScreenCaptureService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer [DEBUG] - class='imagej.ui.swing.overlay.JHotDrawService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.ui.swing.sdi.viewer.SwingSdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer [DEBUG] - class='imagej.ui.swing.SwingIconService', priority=0.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.ui.swing.viewer.table.SwingTableDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer [DEBUG] - class='imagej.ui.swing.viewer.text.SwingTextDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer [DEBUG] - class='imagej.ui.swing.widget.SwingButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingColorTableWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingColorWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingDateWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingFileWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingHistogramWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingTextWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.ui.swing.widget.SwingToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget [DEBUG] - class='imagej.updater.ssh.SFTPFileUploader', priority=0.0, enabled=true, pluginType=Uploader [DEBUG] - class='imagej.updater.ssh.SSHFileUploader', priority=0.0, enabled=true, pluginType=Uploader [DEBUG] - class='imagej.updater.webdav.WebDAVUploader', priority=0.0, enabled=true, pluginType=Uploader [DEBUG] - class='imagej.core.options.OptionsPointTool', menu='Edit > Options > Point Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.debug.PointSetDemo', menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.PowerDataValues', menu='Process > Math > Power...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.app.Preferences', label='Preferences', menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsProfilePlot', menu='Edit > Options > Profile Plot Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.options.OptionsProxy', menu='Edit > Options > Proxy Settings...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.core.commands.app.QuitProgram', label='Quit', menu='File > Quit', iconPath='/icons/commands/door_in.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.RadialNeighborhoodSpecifier', label='Radial Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.ReciprocalDataValues', menu='Process > Math > Reciprocal...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.ui.swing.commands.SwingScriptRecorder', menu='Plugins > Macros > Record...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.RectangularNeighborhoodSpecifier', label='Rectangular Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.RemoveOverlay', menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.RemoveOverlayReferences', menu='Image > Overlay > Remove Overlay References', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.ReorderAxis', menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.ReorderData', menu='Image > Data > Reorder Data...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsReset', menu='Edit > Options > Reset', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.ResizeImage', menu='Image > Adjust > Resize...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.ResliceImage', menu='Image > Stacks > Reslice...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.io.RevertImage', menu='File > Revert', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.rotate.Rotate90DegreesLeft', menu='Image > Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.rotate.Rotate90DegreesRight', menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.RotateImageXY', menu='Image > Transform > Rotate...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsRoundedRectangleTool', menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.script.ScriptPlugin', menu='Plugins > Script > Run Script', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.SaltAndPepper', menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.io.SaveImage', menu='File > Save', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.io.SaveAsImage', menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.script.editor.ScriptEditor', menu='File > New > Script...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.SelectOverlays', menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.SelectView', menu='Edit > Selection > Select View', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.data.display.SelectWindow', label='Select Window...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.axispos.SetActiveAxis', menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.axispos.SetAxisPosition', menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.zoom.ZoomSet', label='Set Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.SetDataValues', menu='Process > Math > Set...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsDemo', menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.SharpenDataValues', menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.misc.ShowInfo', menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.ShowLUT', menu='Image > Color > Show LUT', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.ShowLUTAsTable', menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.SmoothDataValues', menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsSouth', menu='Process > Shadows > South', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsSoutheast', menu='Process > Shadows > Southeast', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsSouthwest', menu='Process > Shadows > Southwest', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.overlay.SelectionSpecify', menu='Edit > Selection > Specify...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.SpectralComposite', menu='Image > Color > Spectral Composite...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.restructure.SplitChannelsContext', menu='Split Channels', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.tools.SprayCanToolConfig', label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.SquareRootDataValues', menu='Process > Math > Square Root...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.SquareDataValues', menu='Process > Math > Square...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.animation.StartAnimation', menu='Image > Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.StatisticsDemo', menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.animation.StopAllAnimations', menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.animation.StopAnimation', menu='Image > Animation > Stop Animation', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.ShowSubscribers', menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.SubtractFromDataValues', menu='Process > Math > Subtract...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.legacy.plugin.SwitchToLegacyMode', menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.interactive.SynchronizeWindows', menu='Analyze > Tools > Synchronize Windows', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.SystemInformation', menu='Plugins > Debug > System Information', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.TableDemo', menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.debug.TextDisplayTest', menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.updater.ui.UpdatesAvailable', label='There are updates available', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.display.interactive.Threshold', menu='Image > Adjust > Threshold...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.ui.swing.mdi.WindowsTileVertical', menu='Window > Tile Vertical', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.zoom.ZoomToSelection', menu='Image > Zoom > To Selection', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.imglib.TranslateImage', menu='Image > Transform > Translate...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.noisereduce.NoiseReductionTrimmedMean', menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.updater.gui.ImageJUpdater', menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI [DEBUG] - class='imagej.core.commands.upload.SampleImageUploader', menu='Help > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.zoom.Zoom100Percent', menu='Image > Zoom > View 100%', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.options.OptionsWandTool', menu='Edit > Options > Wand Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='imagej.ui.swing.commands.debug.WatchEvents', menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.correlate.ShadowsWest', menu='Process > Shadows > West', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.assign.XorDataValuesWith', menu='Process > Math > XOR...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.zoom.ZoomIn', label='Zoom In', menu='Image > Zoom > In', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.zoom.ZoomOut', label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='imagej.core.commands.app.EasterEgg', label='| It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter', name='ArrayDataAccess', priority=0.0, enabled=true, pluginType=PlaneConverter [DEBUG] - class='imagej.core.tools.AxisPositionHandler', name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.data.autoscale.ConfidenceIntervalAutoscaleMethod', name='Confidence Interval', priority=0.0, enabled=true, pluginType=AutoscaleMethod [DEBUG] - class='imagej.core.tools.ContextMenuHandler', name='Context Menus', priority=0.0, enabled=true, pluginType=Tool [DEBUG] - class='io.scif.img.converters.RandomAccessConverter', name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter [DEBUG] - class='imagej.data.autoscale.DefaultAutoscaleMethod', name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod [DEBUG] - class='imagej.data.threshold.DefaultThresholdMethod', name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.HuangThresholdMethod', name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.app.ImageJApp', name='ImageJ', priority=0.0, enabled=true, pluginType=App [DEBUG] - class='imagej.data.threshold.IntermodesThresholdMethod', name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.IsoDataThresholdMethod', name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.LiThresholdMethod', name='Li', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.core.platforms.macosx.MacOSXPlatform', name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform [DEBUG] - class='imagej.data.threshold.MaxEntropyThresholdMethod', name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.MaxLikelihoodThresholdMethod', name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.MeanThresholdMethod', name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.MinErrorThresholdMethod', name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.MinimumThresholdMethod', name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.MomentsThresholdMethod', name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.OtsuThresholdMethod', name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.core.tools.PanActivator', name='Pan Activator', priority=0.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.data.threshold.PercentileThresholdMethod', name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter', name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter [DEBUG] - class='imagej.core.tools.PixelProbe', name='Probe', priority=0.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.data.threshold.RenyiEntropyThresholdMethod', name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0, enabled=true, pluginType=App [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=0.0, enabled=true, pluginType=App [DEBUG] - class='imagej.data.threshold.ShanbhagThresholdMethod', name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.data.threshold.TriangleThresholdMethod', name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.core.tools.FocusHandler', name='Window Focus', priority=0.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.core.platforms.windows.WindowsPlatform', name='Windows', priority=0.0, enabled=true, pluginType=Platform [DEBUG] - class='imagej.data.threshold.YenThresholdMethod', name='Yen', priority=0.0, enabled=true, pluginType=ThresholdMethod [DEBUG] - class='imagej.core.tools.ZoomHandler', name='Zoom Shortcuts', priority=0.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.ui.swing.sdi.SwingUI', name='swing', priority=0.0, enabled=true, pluginType=UserInterface [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.ome.xml.meta.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.JPEGTileFormat', priority=-100.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', priority=-100.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='imagej.display.DefaultTextDisplay', priority=-100.0, enabled=true, pluginType=Display [DEBUG] - class='imagej.platform.DefaultAppEventService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.render.DummyRenderingService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.display.DummyScreenCaptureService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='imagej.data.io.DatasetIOPlugin', priority=-100.0, enabled=true, pluginType=IOPlugin [DEBUG] - class='imagej.ui.dnd.FileDragAndDropHandler', priority=-100.0, enabled=true, pluginType=DragAndDropHandler [DEBUG] - class='imagej.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface [DEBUG] - class='imagej.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin [DEBUG] - class='imagej.core.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool [DEBUG] - class='imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool [DEBUG] - class='imagej.core.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.core.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.core.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.core.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.core.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.core.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.core.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool [DEBUG] - class='imagej.core.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool [DEBUG] - class='imagej.core.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool [DEBUG] - class='io.scif.ome.xml.meta.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.ome.xml.meta.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.TIFFFormat', priority=-9999.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator [DEBUG] - class='imagej.plugin.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='imagej.ui.FilePreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', priority=-10000.0, enabled=true, pluginType=Format [DEBUG] - class='imagej.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin [DEBUG] - class='imagej.core.text.DefaultTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat [DEBUG] - class='imagej.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='imagej.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='imagej.ui.swing.tools.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='imagej.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform [DEBUG] - class='imagej.core.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool [DEBUG] - class='io.scif.formats.TIFFJAIFormat', priority=-10001.0, enabled=true, pluginType=Format [DEBUG] - class='imagej.plugin.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin [INFO] Created service: org.scijava.plugin.DefaultPluginService [DEBUG] [org.scijava.plugin.DefaultPluginService created in 24 ms] [INFO] Found 3 applications. [INFO] Created service: org.scijava.app.DefaultAppService [DEBUG] [org.scijava.app.DefaultAppService created in 28 ms] [DEBUG] Creating service: org.scijava.app.DefaultStatusService [INFO] Created service: org.scijava.app.DefaultStatusService [DEBUG] [org.scijava.app.DefaultStatusService created in 1 ms] [DEBUG] Creating service: org.scijava.event.DefaultEventHistory [INFO] Created service: org.scijava.event.DefaultEventHistory [DEBUG] [org.scijava.event.DefaultEventHistory created in 4 ms] [DEBUG] Creating service: org.scijava.object.DefaultObjectService [INFO] Created service: org.scijava.object.DefaultObjectService [DEBUG] [org.scijava.object.DefaultObjectService created in 2 ms] [DEBUG] Creating service: io.scif.ome.xml.services.DefaultOMEXMLMetadataService [DEBUG] Creating service: io.scif.services.DefaultFormatService [INFO] Created service: io.scif.services.DefaultFormatService [DEBUG] [io.scif.services.DefaultFormatService created in 1 ms] [INFO] Created service: io.scif.ome.xml.services.DefaultOMEXMLMetadataService [DEBUG] [io.scif.ome.xml.services.DefaultOMEXMLMetadataService created in 10 ms] [DEBUG] Creating service: io.scif.ome.xml.services.OMEXMLServiceImpl [DEBUG] Creating service: io.scif.xml.DefaultXMLService [INFO] Created service: io.scif.xml.DefaultXMLService [DEBUG] [io.scif.xml.DefaultXMLService created in 30 ms] [INFO] Created service: io.scif.ome.xml.services.OMEXMLServiceImpl [DEBUG] [io.scif.ome.xml.services.OMEXMLServiceImpl created in 50 ms] [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService [INFO] Created service: io.scif.img.DefaultImgUtilityService [DEBUG] [io.scif.img.DefaultImgUtilityService created in 11 ms] [DEBUG] Creating service: io.scif.services.DefaultTranslatorService [DEBUG] Creating service: io.scif.services.DefaultPluginAttributeService [INFO] Created service: io.scif.services.DefaultPluginAttributeService [DEBUG] [io.scif.services.DefaultPluginAttributeService created in 0 ms] [INFO] Created service: io.scif.services.DefaultTranslatorService [DEBUG] [io.scif.services.DefaultTranslatorService created in 6 ms] [DEBUG] Creating service: io.scif.services.DefaultFilePatternService [INFO] Created service: io.scif.services.DefaultFilePatternService [DEBUG] [io.scif.services.DefaultFilePatternService created in 1 ms] [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService [INFO] Created service: io.scif.formats.qt.DefaultQTJavaService [DEBUG] [io.scif.formats.qt.DefaultQTJavaService created in 5 ms] [DEBUG] Creating service: io.scif.services.DefaultLocationService [DEBUG] Creating service: io.scif.io.DefaultNIOService [INFO] Created service: io.scif.io.DefaultNIOService [DEBUG] [io.scif.io.DefaultNIOService created in 2 ms] [INFO] Created service: io.scif.services.DefaultLocationService [DEBUG] [io.scif.services.DefaultLocationService created in 2 ms] [DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService [INFO] Created service: io.scif.img.converters.DefaultPlaneConverterService [DEBUG] [io.scif.img.converters.DefaultPlaneConverterService created in 3 ms] [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService [INFO] Created service: io.scif.formats.tiff.DefaultTiffService [DEBUG] [io.scif.formats.tiff.DefaultTiffService created in 63 ms] [DEBUG] Creating service: io.scif.codec.DefaultCodecService [INFO] Created service: io.scif.codec.DefaultCodecService [DEBUG] [io.scif.codec.DefaultCodecService created in 0 ms] [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl [INFO] Created service: io.scif.services.JAIIIOServiceImpl [DEBUG] [io.scif.services.JAIIIOServiceImpl created in 9 ms] [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache [INFO] Created service: io.scif.img.cell.cache.MapDBCache [DEBUG] [io.scif.img.cell.cache.MapDBCache created in 101 ms] [DEBUG] Creating service: io.scif.DefaultMetadataService [INFO] Created service: io.scif.DefaultMetadataService [DEBUG] [io.scif.DefaultMetadataService created in 1 ms] [DEBUG] Creating service: imagej.core.commands.app.CoreAppEventService [DEBUG] Creating service: imagej.command.DefaultCommandService [DEBUG] Creating service: imagej.module.DefaultModuleService [INFO] Created service: imagej.module.DefaultModuleService [DEBUG] [imagej.module.DefaultModuleService created in 3 ms] [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command items[1] = label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command items[2] = menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command items[3] = menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command items[4] = menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command items[5] = menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command items[6] = menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command items[7] = menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command items[8] = menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command items[9] = menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command items[10] = menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command items[11] = menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command items[12] = menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=Command items[13] = menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=Command items[14] = menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command items[15] = menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command items[16] = menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command items[17] = menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command items[18] = menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command items[19] = menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command items[20] = menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command items[21] = menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command items[22] = menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command items[23] = menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command items[24] = menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command items[25] = menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command items[26] = menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=Command items[27] = label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command items[28] = menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command items[29] = menu='File > Close', priority=0.0, enabled=true, pluginType=Command items[30] = menu='File > Close All', priority=0.0, enabled=true, pluginType=Command items[31] = menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=Command items[32] = menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=Command items[33] = menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command items[34] = menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=Command items[35] = menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command items[36] = menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command items[37] = menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command items[38] = menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command items[39] = menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=Command items[40] = label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=Command items[41] = menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command items[42] = menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command items[43] = menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command items[44] = menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command items[45] = menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command items[46] = menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command items[47] = menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command items[48] = menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command items[49] = menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command items[50] = menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command items[51] = menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command items[52] = menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command items[53] = menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command items[54] = menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command items[55] = menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command items[56] = menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command items[57] = menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command items[58] = menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command items[59] = menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command items[60] = menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command items[61] = menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command items[62] = label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command items[63] = menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=Command items[64] = menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command items[65] = menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command items[66] = menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command items[67] = menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command items[68] = menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command items[69] = menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command items[70] = menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command items[71] = menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command items[72] = menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=Command items[73] = menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command items[74] = menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command items[75] = menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command items[76] = menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command items[77] = label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command items[78] = menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command items[79] = menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=Command items[80] = menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command items[81] = menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command items[82] = menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=Command items[83] = menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command items[84] = menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command items[85] = menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command items[86] = menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command items[87] = menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command items[88] = menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command items[89] = menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command items[90] = menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command items[91] = menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=Command items[92] = menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command items[93] = menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command items[94] = menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command items[95] = menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=Command items[96] = menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command items[97] = menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command items[98] = menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command items[99] = menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command items[100] = label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command items[101] = menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command items[102] = menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command items[103] = menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command items[104] = menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command items[105] = menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command items[106] = menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command items[107] = menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command items[108] = menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command items[109] = menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command items[110] = label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command items[111] = label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command items[112] = menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command items[113] = label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command items[114] = priority=0.0, enabled=true, pluginType=Command items[115] = priority=0.0, enabled=true, pluginType=Command items[116] = priority=0.0, enabled=true, pluginType=Command items[117] = priority=0.0, enabled=true, pluginType=Command items[118] = menu='Edit > Options > Point Tool...', priority=0.0, enabled=true, pluginType=Command items[119] = menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true, pluginType=Command items[120] = menu='Process > Math > Power...', priority=0.0, enabled=true, pluginType=Command items[121] = label='Preferences', menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command items[122] = menu='Edit > Options > Profile Plot Options...', priority=0.0, enabled=true, pluginType=Command items[123] = menu='Edit > Options > Proxy Settings...', priority=0.0, enabled=true, pluginType=Command items[124] = label='Quit', menu='File > Quit', iconPath='/icons/commands/door_in.png', priority=0.0, enabled=true, pluginType=Command items[125] = label='Radial Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command items[126] = menu='Process > Math > Reciprocal...', priority=0.0, enabled=true, pluginType=Command items[127] = menu='Plugins > Macros > Record...', priority=0.0, enabled=true, pluginType=Command items[128] = label='Rectangular Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command items[129] = menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true, pluginType=Command items[130] = menu='Image > Overlay > Remove Overlay References', priority=0.0, enabled=true, pluginType=Command items[131] = menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true, pluginType=Command items[132] = menu='Image > Data > Reorder Data...', priority=0.0, enabled=true, pluginType=Command items[133] = menu='Edit > Options > Reset', priority=0.0, enabled=true, pluginType=Command items[134] = menu='Image > Adjust > Resize...', priority=0.0, enabled=true, pluginType=Command items[135] = menu='Image > Stacks > Reslice...', priority=0.0, enabled=true, pluginType=Command items[136] = menu='File > Revert', priority=0.0, enabled=true, pluginType=Command items[137] = menu='Image > Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true, pluginType=Command items[138] = menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, enabled=true, pluginType=Command items[139] = menu='Image > Transform > Rotate...', priority=0.0, enabled=true, pluginType=Command items[140] = menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true, pluginType=Command items[141] = menu='Plugins > Script > Run Script', priority=0.0, enabled=true, pluginType=Command items[142] = menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true, pluginType=Command items[143] = menu='File > Save', priority=0.0, enabled=true, pluginType=Command items[144] = menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command items[145] = menu='File > New > Script...', priority=0.0, enabled=true, pluginType=Command items[146] = menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true, pluginType=Command items[147] = menu='Edit > Selection > Select View', priority=0.0, enabled=true, pluginType=Command items[148] = label='Select Window...', priority=0.0, enabled=true, pluginType=Command items[149] = menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true, pluginType=Command items[150] = menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true, pluginType=Command items[151] = label='Set Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true, pluginType=Command items[152] = menu='Process > Math > Set...', priority=0.0, enabled=true, pluginType=Command items[153] = menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true, pluginType=Command items[154] = menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command items[155] = menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command items[156] = menu='Image > Color > Show LUT', priority=0.0, enabled=true, pluginType=Command items[157] = menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true, pluginType=Command items[158] = menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command items[159] = menu='Process > Shadows > South', priority=0.0, enabled=true, pluginType=Command items[160] = menu='Process > Shadows > Southeast', priority=0.0, enabled=true, pluginType=Command items[161] = menu='Process > Shadows > Southwest', priority=0.0, enabled=true, pluginType=Command items[162] = menu='Edit > Selection > Specify...', priority=0.0, enabled=true, pluginType=Command items[163] = menu='Image > Color > Spectral Composite...', priority=0.0, enabled=true, pluginType=Command items[164] = menu='Split Channels', priority=0.0, enabled=true, pluginType=Command items[165] = label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command items[166] = menu='Process > Math > Square Root...', priority=0.0, enabled=true, pluginType=Command items[167] = menu='Process > Math > Square...', priority=0.0, enabled=true, pluginType=Command items[168] = menu='Image > Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command items[169] = menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true, pluginType=Command items[170] = menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true, pluginType=Command items[171] = menu='Image > Animation > Stop Animation', priority=0.0, enabled=true, pluginType=Command items[172] = menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true, pluginType=Command items[173] = menu='Process > Math > Subtract...', priority=0.0, enabled=true, pluginType=Command items[174] = menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true, pluginType=Command items[175] = menu='Analyze > Tools > Synchronize Windows', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command items[176] = menu='Plugins > Debug > System Information', priority=0.0, enabled=true, pluginType=Command items[177] = menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true, pluginType=Command items[178] = menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true, pluginType=Command items[179] = label='There are updates available', priority=0.0, enabled=true, pluginType=Command items[180] = menu='Image > Adjust > Threshold...', priority=0.0, enabled=true, pluginType=Command items[181] = menu='Window > Tile Vertical', priority=0.0, enabled=true, pluginType=Command items[182] = menu='Image > Zoom > To Selection', priority=0.0, enabled=true, pluginType=Command items[183] = menu='Image > Transform > Translate...', priority=0.0, enabled=true, pluginType=Command items[184] = menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, enabled=true, pluginType=Command items[185] = menu='Help > Update...', priority=0.0, enabled=true, pluginType=Command items[186] = menu='Help > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command items[187] = menu='Image > Zoom > View 100%', priority=0.0, enabled=true, pluginType=Command items[188] = menu='Edit > Options > Wand Tool...', priority=0.0, enabled=true, pluginType=Command items[189] = menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, pluginType=Command items[190] = menu='Process > Shadows > West', priority=0.0, enabled=true, pluginType=Command items[191] = menu='Process > Math > XOR...', priority=0.0, enabled=true, pluginType=Command items[192] = label='Zoom In', menu='Image > Zoom > In', priority=0.0, enabled=true, pluginType=Command items[193] = label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true, pluginType=Command items[194] = label='| It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command,null,null), called from non-EDT Thread:null [INFO] Created service: imagej.command.DefaultCommandService [DEBUG] [imagej.command.DefaultCommandService created in 253 ms] [INFO] Created service: imagej.core.commands.app.CoreAppEventService [DEBUG] [imagej.core.commands.app.CoreAppEventService created in 256 ms] [DEBUG] Creating service: imagej.core.commands.restructure.SplitChannelsContextMonitor [DEBUG] Creating service: imagej.data.display.DefaultImageDisplayService [DEBUG] Creating service: imagej.display.DefaultDisplayService [INFO] Created service: imagej.display.DefaultDisplayService [DEBUG] [imagej.display.DefaultDisplayService created in 7 ms] [INFO] Created service: imagej.data.display.DefaultImageDisplayService [DEBUG] [imagej.data.display.DefaultImageDisplayService created in 9 ms] [INFO] Created service: imagej.core.commands.restructure.SplitChannelsContextMonitor [DEBUG] [imagej.core.commands.restructure.SplitChannelsContextMonitor created in 10 ms] [DEBUG] Creating service: imagej.console.DefaultConsoleService [INFO] Created service: imagej.console.DefaultConsoleService [DEBUG] [imagej.console.DefaultConsoleService created in 1 ms] [DEBUG] Creating service: imagej.io.DefaultIOService [INFO] Created service: imagej.io.DefaultIOService [DEBUG] [imagej.io.DefaultIOService created in 1 ms] [DEBUG] Creating service: imagej.io.DefaultRecentFileService [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/Downloads/walbytest.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/Downloads/walbytest.png' items[1] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/FIX thes...dice_1.gif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/FIX these in IJ2/dice_1.gif' items[2] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/da...CR-MONO1-10-chest.dcm', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/dicom/CR-MONO1-10-chest.dcm' items[3] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/te...epsImgColony.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/tiff/epsImgColony.tif' items[4] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejtests/brain.dcm', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/brain.dcm' items[5] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/FIX ...lastchance.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/FIX these in IJ2/lastchance.tif' items[6] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test4.jp2', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test4.jp2' items[7] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/...organ-of-corti.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/FIX these in IJ2/organ-of-corti.tif' items[8] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/writertests/test.ics', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/writertests/test.ics' items[9] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejte...image1.eps', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/image1.eps' items[10] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...ugePlane&sizeX=70000&sizeY=80000.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/hugePlane&sizeX=70000&sizeY=80000.fake' items[11] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/...tubhiswt4D.ome.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/tubhiswt4D.ome.tif' items[12] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/t...4D-series.ome.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/ome-tiff/4D-series.ome.tif' items[13] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...sizeX=256&sizeY=256&sizeZ=100000.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/lotsofplanes&sizeX=256&sizeY=256&sizeZ=100000.fake' items[14] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/test_imag...ankle.dcm', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/dicom/ankle.dcm' items[15] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...gb=3&sizeC=3&sizeX=512&sizeY=512.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/dschoTest&pixelType=int16&rgb=3&sizeC=3&sizeX=512&sizeY=512.fake' items[16] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/d...bat-cochlea-volume.zip', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/zip/bat-cochlea-volume.zip' items[17] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...=2048&sizeT=2000&pixelType=int16.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/test16&sizeX=2048&sizeY=2048&sizeT=2000&pixelType=int16.fake' items[18] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users...multi-channel-4D-series.ome.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/ome-tiff/multi-channel-4D-series.ome.tif' items[19] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test3.jp2', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test3.jp2' items[20] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/...mri-stack-animation.mov', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/mri-stack-animation.mov' items[21] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/Slugthing.jpg', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/Slugthing.jpg' items[22] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...4byteCompressedImageReaderBugFile.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/FIX these in IJ2/4byteCompressedImageReaderBugFile.tif' items[23] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...nt16&sizeX=512&sizeY=512&sizeC=3.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/dschoTest&pixelType=int16&sizeX=512&sizeY=512&sizeC=3.fake' items[24] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test.jpf', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test.jpf' items[25] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imag...mri-stack0.pcx', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/mri-stack0.pcx' items[26] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/writertests/test.eps', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/writertests/test.eps' items[27] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...ype=int16&rgb=3&interleaved=true.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/interleavedRGB&sizeX=256&sizeY=256&sizeC=3&pixelType=int16&rgb=3&interleaved=true.fake' items[28] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejtests/2kx2k.jpf', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/2kx2k.jpf' items[29] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/test_imag...brain.dcm', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/dicom/brain.dcm' items[30] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data...Level001-ES-083.avi', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/Level001-ES-083.avi' items[31] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/testrgb.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/testrgb.png' items[32] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/...tubhiswt4D.ome.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/ome-tiff/tubhiswt4D.ome.tif' items[33] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Us...dschoTest&sizeX=512&sizeY=512.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/dschoTest&sizeX=512&sizeY=512.fake' items[34] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejt...pigfoot.pgm', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/pigfoot.pgm' items[35] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/qdna1.ics', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/qdna1.ics' items[36] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/test_imag...worm.tiff', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/tiff/worm.tiff' items[37] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...6&sizeC=3&sizeZ=5&sizeT=10&rgb=3.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/testRGB&sizeX=256&sizeY=256&sizeC=3&sizeZ=5&sizeT=10&rgb=3.fake' items[38] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejte...dice_1.gif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/dice_1.gif' items[39] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner...Hoechst_ND - n000001.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/tiff/Hoechst_ND - n000001.tif' items[40] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/test...Alx-488-pk.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/tiff/Alx-488-pk.tif' items[41] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/im...DMSOHigh_001.jpg', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/DMSOHigh_001.jpg' items[42] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/writertests/test.avi', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/writertests/test.avi' items[43] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhi...Antarctic_Diatom_D3D_01.ome', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/ome-xml/samples/Antarctic_Diatom_D3D_01.ome' items[44] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...age-goodbrains-warp40-5_e1e-2.am.nrrd', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/average-goodbrains-warp40-5_e1e-2.am.nrrd' items[45] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejtests/test2.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/test2.png' items[46] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejtests/Cats.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/Cats.png' items[47] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/im...kidney_TFl_1.bmp', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/kidney_TFl_1.bmp' items[48] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/writertests/test.java', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/writertests/test.java' items[49] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/Level001-ES-083.avi', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/Level001-ES-083.avi' items[50] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejtests/test1.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/test1.png' items[51] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/image...vogtstar.fits', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/vogtstar.fits' items[52] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/writertests/test.jpeg', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/writertests/test.jpeg' items[53] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...n_0000000418_2010-10-27 13_31_31Z.scn', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/leica-scn/scott/ImageCollection_0000000418_2010-10-27 13_31_31Z.scn' items[54] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Use...MFGTMP_081128200001_A02f239d1.C01', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/cellomics/MFGTMP_081128200001_A02f239d1.C01' items[55] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/burgh.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/burgh.png' items[56] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test.png' items[57] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/test_ima...image3.eps', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/eps/image3.eps' items[58] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/writertests/test.mov', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/writertests/test.mov' items[59] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /User...MFGTMP_081222130005_E07f00d0.C01', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/cellomics/MFGTMP_081222130005_E07f00d0.C01' items[60] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/dat...a_fixall_buta1a2.txt', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/a_fixall_buta1a2.txt' items[61] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejt...rgbtest.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/rgbtest.png' items[62] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data...tubhiswt_C1.ome.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/ome-tiff-multi/tubhiswt_C1.ome.tif' items[63] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imag...australia1.mng', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/australia1.mng' items[64] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/pnggrad8rgb.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/pnggrad8rgb.png' items[65] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner...strike-uncompressed.tiff', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/FIX these in IJ2/strike-uncompressed.tiff' items[66] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/farbtest.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/farbtest.png' items[67] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/argh.java', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/argh.java' items[68] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejte...blergh.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/blergh.png' items[69] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...pe=int16&rgb=3&interleaved=false.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/testRGB&sizeX=256&sizeY=256&sizeC=3&pixelType=int16&rgb=3&interleaved=false.fake' items[70] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagej...FLAG_B24.PCT', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/FLAG_B24.PCT' items[71] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...ugePlane&sizeX=70000&sizeY=80000.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/hugePlane&sizeX=70000&sizeY=80000.fake' items[72] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test4.jpf', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test4.jpf' items[73] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test2.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test2.tif' items[74] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/te...z-series.ome.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/ome-tiff/z-series.ome.tif' items[75] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test.tiff', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test.tiff' items[76] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejtests/test3.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/test3.png' items[77] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...=2048&sizeY=2048&pixelType=int16.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/test16&sizeX=2048&sizeY=2048&pixelType=int16.fake' items[78] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...nt16&sizeC=3&sizeX=512&sizeY=512.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/dschoTest&pixelType=int16&sizeC=3&sizeX=512&sizeY=512.fake' items[79] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/Cats.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/Cats.png' items[80] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test5.jp2', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test5.jp2' items[81] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/writertests/test2.eps', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/writertests/test2.eps' items[82] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test.tif' items[83] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/d...EL_ImageToProcess2.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/EL_ImageToProcess2.png' items[84] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/test_...abdominal.dcm', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/dicom/abdominal.dcm' items[85] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/blergh.java', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/blergh.java' items[86] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejtests/qdna1.ics', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/qdna1.ics' items[87] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/writertests/test.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/writertests/test.png' items[88] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/test3.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/test3.tif' items[89] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/FIX thes...scifio.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/FIX these in IJ2/scifio.tif' items[90] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejtests/qdna1.ids', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/qdna1.ids' items[91] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...6&sizeC=3&sizeT=10&sizeZ=5&rgb=3.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/testRGB&sizeX=256&sizeY=256&sizeC=3&sizeT=10&sizeZ=5&rgb=3.fake' items[92] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/imagejt...testrgb.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/testrgb.png' items[93] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/ima...img_0_Cy5_1.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/img_0_Cy5_1.tif' items[94] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/d...bat-cochlea-volume.zip', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/bat-cochlea-volume.zip' items[95] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/...tiffany.color.tiff', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/tiff/tiffany.color.tiff' items[96] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/test11_R3D.dv', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test11_R3D.dv' items[97] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/FIX the...scifio4.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/FIX these in IJ2/scifio4.tif' items[98] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/0.ome.tiff', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/0.ome.tiff' items[99] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/blergh.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/blergh.png' items[100] = class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/ima...pnggrad8rgb.png', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/pnggrad8rgb.png',null,null), called from non-EDT Thread:null [INFO] Created service: imagej.io.DefaultRecentFileService [DEBUG] [imagej.io.DefaultRecentFileService created in 95 ms] [DEBUG] Creating service: imagej.menu.DefaultMenuService [INFO] Created service: imagej.menu.DefaultMenuService [DEBUG] [imagej.menu.DefaultMenuService created in 2 ms] [DEBUG] Creating service: imagej.options.DefaultOptionsService [INFO] Created service: imagej.options.DefaultOptionsService [DEBUG] [imagej.options.DefaultOptionsService created in 1 ms] [DEBUG] Creating service: imagej.platform.DefaultPlatformService [INFO] Found 3 Platform plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.platforms.macosx.MacOSXPlatform@717d91,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.platforms.windows.WindowsPlatform@1302fc5,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.platform.DefaultPlatform@903025,null,null), called from non-EDT Thread:null [INFO] Configuring platform: imagej.core.platforms.macosx.MacOSXPlatform [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = label='About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command items[1] = label='Preferences', priority=0.0, enabled=true, pluginType=Command items[2] = label='Quit', iconPath='/icons/commands/door_in.png', priority=0.0, enabled=true, pluginType=Command,null,null), called from non-EDT Thread:null [WARNING] ShadowMenu: menu item already exists: existing: class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...ugePlane&sizeX=70000&sizeY=80000.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/hugePlane&sizeX=70000&sizeY=80000.fake' ignored: class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > ...ugePlane&sizeX=70000&sizeY=80000.fake', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/hugePlane&sizeX=70000&sizeY=80000.fake' [WARNING] ShadowMenu: menu item already exists: existing: class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/d...bat-cochlea-volume.zip', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/zip/bat-cochlea-volume.zip' ignored: class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/d...bat-cochlea-volume.zip', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/bat-cochlea-volume.zip' [WARNING] ShadowMenu: menu item already exists: existing: class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/...tubhiswt4D.ome.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/imagejtests/tubhiswt4D.ome.tif' ignored: class='imagej.core.commands.io.OpenFile', menu='File > Open Recent > /Users/mhiner/data/...tubhiswt4D.ome.tif', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command, inputFile='/Users/mhiner/data/test_images_good/ome-tiff/tubhiswt4D.ome.tif' [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Analyze Histogram Plot Tools Synchronize Windows items[1] = Window Tile Vertical items[2] = Edit Copy To System Fill Invert... Options Line Width... Input/Output... Fonts... Profile Plot Options... Rounded Rect Tool... Arrow Tool... Point Tool... Wand Tool... Channels... Appearance... Conversions... Memory & Threads... Proxy Settings... Compiler... DICOM... Compatibility... Misc... Reset Look and Feel... Selection Select View Select Overlays Deselect Overlays Specify... items[3] = Image Adjust Auto-Contrast Brightness/Contrast... Delete Threshold Resize... Threshold... Animation Start Animation Stop Animation Stop All Animations Animation Options... Axes Add Axis... Axis Position Backward Axis Position Forward Delete Axis... Edit Axes... Reorder Axis Set Active Axis... Set Axis Position... Color Channels Tool... Show LUT Show LUT As Table Spectral Composite... Crop Data Add Data... Delete Data... Reorder Data... Duplicate Lookup Tables Select... Overlay From Overlay Manager Remove Overlay References Remove Overlay Flatten Properties... Labels... Add Image Overlay Manager Overlay Options... Show Info... Stacks Orthogonal Views Reslice... Transform Flip Horizontally Flip Vertically Flip Axis Rotate 90 Degrees Right Rotate 90 Degrees Left Bin... Rotate... Translate... Type Change... Zoom In Out Original Scale View 100% To Selection Set... items[4] = Help ImageJ Website... Switch to Legacy Mode Update... Upload Sample Image items[5] = Process Smooth Sharpen Find Edges Image Calculator... Binary Binarize... Close Create Mask... Dilate Erode Make Binary... Make Mask Overlay... Open Filters Gaussian Blur... Math Add... Subtract... Multiply... Divide... Power... AND... OR... XOR... Min... Max... Gamma... Set... Log... Exp... Square... Square Root... Reciprocal... NaN Background Abs... Equation... Noise Add Noise... Add Specified Noise... Salt and Pepper Noise Reduction Adaptive Median Alpha Trimmed Mean Contraharmonic Mean Geometric Mean Harmonic Mean Maximum Mean Median Midpoint Minimum Trimmed Mean Shadows North Northeast East Southeast South Southwest West Northwest Shadows Demo items[6] = File Open... Open Recent ...4byteCompressedImageReaderBugFile.tif ...6&sizeC=3&sizeT=10&sizeZ=5&rgb=3.fake ...6&sizeC=3&sizeZ=5&sizeT=10&rgb=3.fake ...=2048&sizeT=2000&pixelType=int16.fake ...=2048&sizeY=2048&pixelType=int16.fake ...age-goodbrains-warp40-5_e1e-2.am.nrrd ...gb=3&sizeC=3&sizeX=512&sizeY=512.fake ...n_0000000418_2010-10-27 13_31_31Z.scn ...nt16&sizeC=3&sizeX=512&sizeY=512.fake ...nt16&sizeX=512&sizeY=512&sizeC=3.fake ...pe=int16&rgb=3&interleaved=false.fake ...sizeX=256&sizeY=256&sizeZ=100000.fake ...ugePlane&sizeX=70000&sizeY=80000.fake ...ype=int16&rgb=3&interleaved=true.fake /Us...dschoTest&sizeX=512&sizeY=512.fake /Use...MFGTMP_081128200001_A02f239d1.C01 /User...MFGTMP_081222130005_E07f00d0.C01 /Users...multi-channel-4D-series.ome.tif /Users/mhi...Antarctic_Diatom_D3D_01.ome /Users/mhiner...Hoechst_ND - n000001.tif /Users/mhiner...strike-uncompressed.tiff /Users/mhiner/...mri-stack-animation.mov /Users/mhiner/Downloads/walbytest.png /Users/mhiner/argh.java /Users/mhiner/blergh.png /Users/mhiner/d...EL_ImageToProcess2.png /Users/mhiner/d...bat-cochlea-volume.zip /Users/mhiner/da...CR-MONO1-10-chest.dcm /Users/mhiner/dat...a_fixall_buta1a2.txt /Users/mhiner/data...Level001-ES-083.avi /Users/mhiner/data...tubhiswt_C1.ome.tif /Users/mhiner/data/...organ-of-corti.tif /Users/mhiner/data/...tiffany.color.tiff /Users/mhiner/data/...tubhiswt4D.ome.tif /Users/mhiner/data/0.ome.tiff /Users/mhiner/data/Cats.png /Users/mhiner/data/FIX ...lastchance.tif /Users/mhiner/data/FIX the...scifio4.tif /Users/mhiner/data/FIX thes...dice_1.gif /Users/mhiner/data/FIX thes...scifio.tif /Users/mhiner/data/Level001-ES-083.avi /Users/mhiner/data/Slugthing.jpg /Users/mhiner/data/blergh.java /Users/mhiner/data/burgh.png /Users/mhiner/data/farbtest.png /Users/mhiner/data/im...DMSOHigh_001.jpg /Users/mhiner/data/im...kidney_TFl_1.bmp /Users/mhiner/data/ima...img_0_Cy5_1.tif /Users/mhiner/data/ima...pnggrad8rgb.png /Users/mhiner/data/imag...australia1.mng /Users/mhiner/data/imag...mri-stack0.pcx /Users/mhiner/data/image...vogtstar.fits /Users/mhiner/data/imagej...FLAG_B24.PCT /Users/mhiner/data/imagejt...pigfoot.pgm /Users/mhiner/data/imagejt...rgbtest.png /Users/mhiner/data/imagejt...testrgb.png /Users/mhiner/data/imagejte...blergh.png /Users/mhiner/data/imagejte...dice_1.gif /Users/mhiner/data/imagejte...image1.eps /Users/mhiner/data/imagejtests/2kx2k.jpf /Users/mhiner/data/imagejtests/Cats.png /Users/mhiner/data/imagejtests/brain.dcm /Users/mhiner/data/imagejtests/qdna1.ics /Users/mhiner/data/imagejtests/qdna1.ids /Users/mhiner/data/imagejtests/test1.png /Users/mhiner/data/imagejtests/test2.png /Users/mhiner/data/imagejtests/test3.png /Users/mhiner/data/pnggrad8rgb.png /Users/mhiner/data/qdna1.ics /Users/mhiner/data/t...4D-series.ome.tif /Users/mhiner/data/te...epsImgColony.tif /Users/mhiner/data/te...z-series.ome.tif /Users/mhiner/data/test...Alx-488-pk.tif /Users/mhiner/data/test11_R3D.dv /Users/mhiner/data/test_...abdominal.dcm /Users/mhiner/data/test_ima...image3.eps /Users/mhiner/data/test_imag...ankle.dcm /Users/mhiner/data/test_imag...brain.dcm /Users/mhiner/data/test_imag...worm.tiff /Users/mhiner/data/writertests/test.avi /Users/mhiner/data/writertests/test.eps /Users/mhiner/data/writertests/test.ics /Users/mhiner/data/writertests/test.java /Users/mhiner/data/writertests/test.jpeg /Users/mhiner/data/writertests/test.mov /Users/mhiner/data/writertests/test.png /Users/mhiner/data/writertests/test2.eps /Users/mhiner/test.jpf /Users/mhiner/test.png /Users/mhiner/test.tif /Users/mhiner/test.tiff /Users/mhiner/test2.tif /Users/mhiner/test3.jp2 /Users/mhiner/test3.tif /Users/mhiner/test4.jp2 /Users/mhiner/test4.jpf /Users/mhiner/test5.jp2 /Users/mhiner/testrgb.png Clear List Close Close All Revert Save Save As... New Image... Script... items[7] = Plugins Debug Inspect Image Inspect Objects Invalid Command Subscribers System Information Watch Events Macros Record... Sandbox Button Demo Dialog Prompt Demo Mandelbrot Set Measurement Demo Mixed World Command Multidimensional Test Image Parameter Assignment Order PointSet Demo Statistics Demo Table Demo TextDisplayTest Script Run Script Shortcuts List Shortcuts... Create Shortcut... Utilities Capture Screen Capture Image Benchmark Find Commands...,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Duplicate... items[1] = Split Channels,null,null), called from non-EDT Thread:null [INFO] Configuring platform: imagej.platform.DefaultPlatform [INFO] Created service: imagej.platform.DefaultPlatformService [DEBUG] [imagej.platform.DefaultPlatformService created in 90 ms] [DEBUG] Creating service: imagej.script.DefaultScriptService [INFO] Found 0 scripts [INFO] Created service: imagej.script.DefaultScriptService [DEBUG] [imagej.script.DefaultScriptService created in 24 ms] [DEBUG] Creating service: imagej.text.DefaultTextService [INFO] Created service: imagej.text.DefaultTextService [DEBUG] [imagej.text.DefaultTextService created in 0 ms] [DEBUG] Creating service: imagej.tool.DefaultToolService [INFO] Created service: imagej.tool.DefaultToolService [DEBUG] [imagej.tool.DefaultToolService created in 6 ms] [DEBUG] Creating service: imagej.widget.DefaultWidgetService [INFO] Found 13 InputWidget plugins. [INFO] Created service: imagej.widget.DefaultWidgetService [DEBUG] [imagej.widget.DefaultWidgetService created in 1 ms] [DEBUG] Creating service: imagej.data.animation.DefaultAnimationService [INFO] Created service: imagej.data.animation.DefaultAnimationService [DEBUG] [imagej.data.animation.DefaultAnimationService created in 1 ms] [DEBUG] Creating service: imagej.data.autoscale.DefaultAutoscaleService [INFO] Created service: imagej.data.autoscale.DefaultAutoscaleService [DEBUG] [imagej.data.autoscale.DefaultAutoscaleService created in 1 ms] [DEBUG] Creating service: imagej.data.DefaultDatasetService [DEBUG] Creating service: imagej.data.types.DefaultDataTypeService [INFO] Found 11 DataType plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType12BitUnsignedInteger@538974,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType16BitSignedInteger@6545d2,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType16BitUnsignedInteger@cade31,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType1BitUnsignedInteger@c1a0eb,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType32BitSignedFloat@1be8711,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType32BitSignedInteger@1958cc2,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType32BitUnsignedInteger@14c28db,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType64BitSignedFloat@73f0d8,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType64BitSignedInteger@1e91a4d,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType8BitSignedInteger@bdc9b3,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.types.DataType8BitUnsignedInteger@523df,null,null), called from non-EDT Thread:null [INFO] Created service: imagej.data.types.DefaultDataTypeService [DEBUG] [imagej.data.types.DefaultDataTypeService created in 35 ms] [INFO] Created service: imagej.data.DefaultDatasetService [DEBUG] [imagej.data.DefaultDatasetService created in 39 ms] [DEBUG] Creating service: imagej.data.DefaultImgPlusService [INFO] Created service: imagej.data.DefaultImgPlusService [DEBUG] [imagej.data.DefaultImgPlusService created in 0 ms] [DEBUG] Creating service: imagej.data.display.DefaultInputService [INFO] Created service: imagej.data.display.DefaultInputService [DEBUG] [imagej.data.display.DefaultInputService created in 1 ms] [DEBUG] Creating service: imagej.data.display.DefaultOverlayService [DEBUG] Creating service: imagej.ui.common.awt.AWTRenderingService [INFO] Created service: imagej.ui.common.awt.AWTRenderingService [DEBUG] [imagej.ui.common.awt.AWTRenderingService created in 0 ms] [INFO] Created service: imagej.data.display.DefaultOverlayService [DEBUG] [imagej.data.display.DefaultOverlayService created in 4 ms] [DEBUG] Creating service: imagej.data.display.DefaultWindowService [INFO] Created service: imagej.data.display.DefaultWindowService [DEBUG] [imagej.data.display.DefaultWindowService created in 0 ms] [DEBUG] Creating service: imagej.data.lut.DefaultLUTService [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > Rainbow RGB', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/Rainbow%20RGB.lut items[1] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Magenta', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Magenta.lut items[2] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Blue', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Blue.lut items[3] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Yellow', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Yellow.lut items[4] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Red', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Red.lut items[5] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > sepia', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/sepia.lut items[6] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > Green Fire Blue', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/Green%20Fire%20Blue.lut items[7] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Grays', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Grays.lut items[8] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > Magenta Hot', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/Magenta%20Hot.lut items[9] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > Cyan Hot', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/Cyan%20Hot.lut items[10] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > 3-3-2 RGB', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/3-3-2%20RGB.lut items[11] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > edges', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/edges.lut items[12] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Spectrum', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Spectrum.lut items[13] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Fire', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Fire.lut items[14] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > unionjack', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/unionjack.lut items[15] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > Orange Hot', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/Orange%20Hot.lut items[16] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > Red Hot', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/Red%20Hot.lut items[17] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > 5_ramps', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/5_ramps.lut items[18] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > ICA', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/ICA.lut items[19] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > thallium', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/thallium.lut items[20] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > phase', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/phase.lut items[21] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > royal', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/royal.lut items[22] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Green', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Green.lut items[23] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > smart', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/smart.lut items[24] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Cyan', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Cyan.lut items[25] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > thal', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/thal.lut items[26] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > Yellow Hot', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/Yellow%20Hot.lut items[27] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > cool', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/cool.lut items[28] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > 6_shades', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/6_shades.lut items[29] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > ICA2', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/ICA2.lut items[30] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > brgbcmyw', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/brgbcmyw.lut items[31] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > 16_colors', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/16_colors.lut items[32] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > HiLo', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/HiLo.lut items[33] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Ice', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Ice.lut items[34] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > blue_orange_icb', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/blue_orange_icb.lut items[35] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > NCSA PalEdit > gem', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/NCSA%20PalEdit/gem.lut items[36] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > WCIF > ICA3', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/WCIF/ICA3.lut items[37] = class='imagej.core.commands.misc.ApplyLookupTable', menu='Image > Lookup Tables > Red-Green', priority=0.0, enabled=true, pluginType=Command, tableURL=jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-data-2.0.0-SNAPSHOT.jar!/luts/Red-Green.lut,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Image Adjust Auto-Contrast Brightness/Contrast... Delete Threshold Resize... Threshold... Animation Start Animation Stop Animation Stop All Animations Animation Options... Axes Add Axis... Axis Position Backward Axis Position Forward Delete Axis... Edit Axes... Reorder Axis Set Active Axis... Set Axis Position... Color Channels Tool... Show LUT Show LUT As Table Spectral Composite... Crop Data Add Data... Delete Data... Reorder Data... Duplicate Lookup Tables Select... 3-3-2 RGB Blue Cyan Fire Grays Green Ice Magenta Red Red-Green Spectrum Yellow NCSA PalEdit 16_colors 5_ramps 6_shades blue_orange_icb brgbcmyw cool edges gem phase royal sepia smart thal thallium unionjack WCIF Cyan Hot Green Fire Blue HiLo ICA ICA2 ICA3 Magenta Hot Orange Hot Rainbow RGB Red Hot Yellow Hot Overlay From Overlay Manager Remove Overlay References Remove Overlay Flatten Properties... Labels... Add Image Overlay Manager Overlay Options... Show Info... Stacks Orthogonal Views Reslice... Transform Flip Horizontally Flip Vertically Flip Axis Rotate 90 Degrees Right Rotate 90 Degrees Left Bin... Rotate... Translate... Type Change... Zoom In Out Original Scale View 100% To Selection Set...,null,null), called from non-EDT Thread:null [INFO] Created service: imagej.data.lut.DefaultLUTService [DEBUG] [imagej.data.lut.DefaultLUTService created in 19 ms] [DEBUG] Creating service: imagej.data.measure.DefaultMeasurementService [INFO] Created service: imagej.data.measure.DefaultMeasurementService [DEBUG] [imagej.data.measure.DefaultMeasurementService created in 1 ms] [DEBUG] Creating service: imagej.data.measure.DefaultStatisticsService [INFO] Created service: imagej.data.measure.DefaultStatisticsService [DEBUG] [imagej.data.measure.DefaultStatisticsService created in 1 ms] [DEBUG] Creating service: imagej.data.operator.DefaultCalculatorService [INFO] Created service: imagej.data.operator.DefaultCalculatorService [DEBUG] [imagej.data.operator.DefaultCalculatorService created in 1 ms] [DEBUG] Creating service: imagej.data.sampler.DefaultSamplerService [INFO] Created service: imagej.data.sampler.DefaultSamplerService [DEBUG] [imagej.data.sampler.DefaultSamplerService created in 1 ms] [DEBUG] Creating service: imagej.data.threshold.DefaultThresholdService [INFO] Created service: imagej.data.threshold.DefaultThresholdService [DEBUG] [imagej.data.threshold.DefaultThresholdService created in 2 ms] [DEBUG] Creating service: imagej.ui.DefaultUIService [INFO] Created service: imagej.ui.DefaultUIService [DEBUG] [imagej.ui.DefaultUIService created in 2 ms] [DEBUG] Creating service: imagej.ui.dnd.DefaultDragAndDropService [INFO] Created service: imagej.ui.dnd.DefaultDragAndDropService [DEBUG] [imagej.ui.dnd.DefaultDragAndDropService created in 3 ms] [DEBUG] Creating service: imagej.updater.core.DefaultUploaderService [INFO] Created service: imagej.updater.core.DefaultUploaderService [DEBUG] [imagej.updater.core.DefaultUploaderService created in 2 ms] [DEBUG] Creating service: imagej.legacy.DefaultLegacyService [DEBUG] - [BLACKLISTED, OVERRIDDEN] ij.plugin.LutLoader("3-3-2 RGB") [menu = Image > Lookup Tables > 3-3-2 RGB, weight = 16.0] [WARNING] Overridden plugin ij.plugin.LutLoader("3-3-2 RGB") is blacklisted [DEBUG] - ij.plugin.filter.RankFilters("despeckle") [menu = Process > Noise > Despeckle, weight = 13.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Transformer("flipv") [menu = Image > Transform > Flip Vertically, weight = 1.0] [DEBUG] - ij.plugin.Commands("startup") [menu = Plugins > Macros > Startup Macros..., weight = 3.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Binary("open") [menu = Process > Binary > Open, weight = 14.0] [DEBUG] - ij.plugin.XY_Reader [menu = File > Import > XY Coordinates... , weight = 11.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("northeast") [menu = Process > Shadows > Northeast, weight = 1.0] [DEBUG] - [OVERRIDDEN] ij.plugin.frame.ContrastAdjuster [menu = Image > Adjust > Brightness/Contrast..., weight = 0.0] [DEBUG] - ij.plugin.LutLoader("invert") [menu = Image > Lookup Tables > Invert LUT, weight = 0.0] [DEBUG] - [BLACKLISTED] ij.plugin.OverlayCommands("add") [menu = Image > Overlay > Add Selection..., weight = 0.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Filters("sharpen") [menu = Process > Sharpen, weight = 1.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("or") [menu = Process > Math > OR..., weight = 5.0] [DEBUG] - ij.plugin.Concatenator [menu = Image > Stacks > Tools > Concatenate..., weight = 1.0] [DEBUG] - [BLACKLISTED] ij.plugin.Animator("next") [menu = Image > Stacks > Next Slice [>], weight = 2.0] [DEBUG] - ij.plugin.URLOpener("mri-stack.zip") [menu = File > Open Samples > MRI Stack (528K), weight = 21.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.ImageMath("sqr") [menu = Process > Math > Square, weight = 13.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Filters("noise") [menu = Process > Noise > Add Specified Noise..., weight = 1.0] [DEBUG] - ij.plugin.URLOpener("cache") [menu = File > Open Samples > Cache Sample Images , weight = 41.0] [DEBUG] - ij.plugin.GelAnalyzer("options") [menu = Analyze > Gels > Gel Analyzer Options..., weight = 6.0] [DEBUG] - ij.plugin.CanvasResizer [menu = Image > Adjust > Canvas Size..., weight = 6.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("red") [menu = Image > Lookup Tables > Red, weight = 17.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("min") [menu = Process > Math > Min..., weight = 7.0] [DEBUG] - ij.plugin.Selection("mask") [menu = Edit > Selection > Create Mask, weight = 10.0] [DEBUG] - ij.plugin.filter.Rotator [menu = Image > Transform > Rotate... , weight = 5.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Zoom("100%") [menu = Image > Zoom > View 100%, weight = 3.0] [DEBUG] - ij.plugin.URLOpener("NileBend.jpg") [menu = File > Open Samples > Nile Bend (1.9M), weight = 24.0] [DEBUG] - ij.plugin.filter.LutApplier [menu = Image > Lookup Tables > Apply LUT, weight = 1.0] [DEBUG] - ij.plugin.Selection("toarea") [menu = Edit > Selection > Line to Area, weight = 29.0] [DEBUG] - ij.plugin.frame.PasteController [menu = Edit > Paste Control..., weight = 15.0] [DEBUG] - ij.plugin.Scaler [menu = Image > Scale..., weight = 30.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Filler("fill") [menu = Edit > Fill, weight = 28.0] [DEBUG] - [BLACKLISTED] ij.plugin.ImageJ_Updater [menu = Help > Update ImageJ..., weight = 29.0] [DEBUG] - ij.plugin.URLOpener("flybrain.zip") [menu = File > Open Samples > Fly Brain (1MB), weight = 14.0] [DEBUG] - ij.plugin.GelAnalyzer("reset") [menu = Analyze > Gels > Reset, weight = 4.0] [DEBUG] - ij.plugin.TextWriter [menu = File > Save As > Text..., weight = 16.0] [DEBUG] - ij.plugin.OverlayCommands("image-roi") [menu = Edit > Selection > Image to Selection..., weight = 31.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Options("misc") [menu = Edit > Options > Misc..., weight = 15.0] [DEBUG] - ij.plugin.frame.ContrastAdjuster("wl") [menu = Image > Adjust > Window/Level..., weight = 1.0] [DEBUG] - ij.plugin.BrowserLauncher("http://imagej.nih.gov/ij/plugins") [menu = Help > Plugins..., weight = 16.0] [DEBUG] - ij.plugin.URLOpener("AuPbSn40.jpg") [menu = File > Open Samples > AuPbSn 40 (56K), weight = 0.0] [DEBUG] - ij.plugin.URLOpener [menu = File > Import > URL..., weight = 7.0] [DEBUG] - ij.plugin.Resizer [menu = Image > Adjust > Size..., weight = 5.0] [DEBUG] - ij.plugin.Converter("HSB Stack") [menu = Image > Type > HSB Stack, weight = 16.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Benchmark [menu = Plugins > Utilities > Benchmark, weight = 29.0] [DEBUG] - ij.plugin.SimpleCommands("install") [menu = Help > Installation..., weight = 3.0] [DEBUG] - [OVERRIDDEN] ij.plugin.ProxySettings [menu = Edit > Options > Proxy Settings..., weight = 12.0] [DEBUG] - ij.plugin.Selection("spline") [menu = Edit > Selection > Fit Spline, weight = 3.0] [DEBUG] - ij.plugin.filter.StackLabeler [menu = Image > Stacks > Label..., weight = 23.0] [DEBUG] - ij.plugin.filter.Writer("text") [menu = File > Save As > Text Image..., weight = 3.0] [DEBUG] - [BLACKLISTED] ij.plugin.Converter("8-bit") [menu = Image > Type > 8-bit, weight = 0.0] [DEBUG] - [OVERRIDDEN] ij.plugin.ImageCalculator [menu = Process > Image Calculator..., weight = 22.0] [DEBUG] - ij.plugin.FolderOpener [menu = File > Import > Image Sequence..., weight = 0.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Options("conv") [menu = Edit > Options > Conversions..., weight = 10.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Binary("erode") [menu = Process > Binary > Erode, weight = 12.0] [DEBUG] - ij.plugin.Filters3D("median") [menu = Process > Filters > Median 3D..., weight = 19.0] [DEBUG] - ij.plugin.filter.FFTFilter [menu = Process > FFT > Bandpass Filter..., weight = 14.0] [DEBUG] - ij.plugin.GelAnalyzer("next") [menu = Analyze > Gels > Select Next Lane, weight = 1.0] [DEBUG] - ij.plugin.filter.ScaleDialog [menu = Analyze > Set Scale..., weight = 17.0] [DEBUG] - [BLACKLISTED] ij.plugin.StackEditor("delete") [menu = Image > Stacks > Delete Slice, weight = 1.0] [DEBUG] - ij.plugin.filter.Printer("print") [menu = File > Print..., weight = 32.0] [DEBUG] - ij.plugin.BatchProcessor("stack") [menu = Process > Batch > Virtual Stack..., weight = 3.0] [DEBUG] - ij.plugin.URLOpener("embryos.jpg") [menu = File > Open Samples > Embryos (42K), weight = 12.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Commands("revert") [menu = File > Revert, weight = 20.0] [DEBUG] - [BLACKLISTED] ij.plugin.OverlayCommands("show") [menu = Image > Overlay > Show Overlay, weight = 3.0] [DEBUG] - ij.plugin.filter.Calibrator [menu = Analyze > Calibrate..., weight = 18.0] [DEBUG] - ij.plugin.filter.Binary("fill") [menu = Process > Binary > Fill Holes, weight = 27.0] [DEBUG] - ij.plugin.Selection("hull") [menu = Edit > Selection > Convex Hull, weight = 7.0] [DEBUG] - ij.plugin.filter.CalibrationBar [menu = Analyze > Tools > Calibration Bar..., weight = 6.0] [DEBUG] - ij.plugin.RoiEnlarger [menu = Edit > Selection > Enlarge..., weight = 24.0] [DEBUG] - ij.plugin.URLOpener("t1-head.zip") [menu = File > Open Samples > T1 Head (2.4M, 16-bits), weight = 27.0] [DEBUG] - ij.plugin.SimpleCommands("set") [menu = Image > Stacks > Tools > Set Label..., weight = 8.0] [DEBUG] - ij.plugin.URLOpener("Cell_Colony.jpg") [menu = File > Open Samples > Cell Colony (31K), weight = 7.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.ImageMath("log") [menu = Process > Math > Log, weight = 11.0] [DEBUG] - ij.plugin.Converter("RGB Stack") [menu = Image > Type > RGB Stack, weight = 15.0] [DEBUG] - ij.plugin.GelAnalyzer("replot") [menu = Analyze > Gels > Re-plot Lanes, weight = 3.0] [DEBUG] - ij.plugin.URLOpener("bridge.gif") [menu = File > Open Samples > Bridge (174K), weight = 5.0] [DEBUG] - ij.plugin.filter.Filler("label") [menu = Analyze > Label, weight = 4.0] [DEBUG] - [BLACKLISTED] ij.plugin.Animator("set") [menu = Image > Stacks > Set Slice..., weight = 4.0] [DEBUG] - ij.plugin.Clipboard("cut") [menu = Edit > Cut, weight = 11.0] [DEBUG] - ij.plugin.filter.ImageProperties [menu = Image > Properties..., weight = 13.0] [DEBUG] - ij.plugin.Histogram [menu = Analyze > Histogram, weight = 19.0] [DEBUG] - ij.plugin.StackCombiner [menu = Image > Stacks > Tools > Combine..., weight = 0.0] [DEBUG] - ij.plugin.TextFileReader [menu = File > Import > Text File... , weight = 4.0] [DEBUG] - ij.plugin.SimpleCommands("display") [menu = Image > Color > Display LUTs, weight = 17.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("max") [menu = Process > Math > Max..., weight = 8.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Resizer("crop") [menu = Image > Crop, weight = 27.0] [DEBUG] - ij.plugin.HyperStackMaker [menu = Image > Hyperstacks > New Hyperstack..., weight = 0.0] [DEBUG] - ij.plugin.BrowserLauncher("http://imagej.nih.gov/ij/macros/") [menu = Help > Macros..., weight = 17.0] [DEBUG] - ij.plugin.Converter("RGB Color") [menu = Image > Type > RGB Color, weight = 4.0] [DEBUG] - ij.plugin.SimpleCommands("about") [menu = Help > About Plugins > About This Submenu..., weight = 0.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Transformer("fliph") [menu = Image > Transform > Flip Horizontally, weight = 0.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Options("dicom") [menu = Edit > Options > DICOM..., weight = 14.0] [DEBUG] - ij.plugin.filter.Filler("outside") [menu = Edit > Clear Outside, weight = 27.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("add") [menu = Process > Math > Add..., weight = 0.0] [DEBUG] - ij.plugin.NextImageOpener [menu = File > Open Next, weight = 2.0] [DEBUG] - ij.plugin.filter.Convolver [menu = Process > Filters > Convolve..., weight = 0.0] [DEBUG] - ij.plugin.ChannelSplitter [menu = Image > Color > Split Channels, weight = 0.0] [DEBUG] - ij.plugin.RGBStackMerge [menu = Image > Color > Merge Channels..., weight = 1.0] [DEBUG] - ij.plugin.Compiler("edit") [menu = Plugins > Macros > Edit..., weight = 2.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("mul") [menu = Process > Math > Multiply..., weight = 2.0] [DEBUG] - [BLACKLISTED] ij.plugin.Selection("all") [menu = Edit > Selection > Select All, weight = 0.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Zoom("to") [menu = Image > Zoom > To Selection, weight = 4.0] [DEBUG] - ij.plugin.NewPlugin("plugin-tool") [menu = Plugins > New > Plugin Tool, weight = 16.0] [DEBUG] - ij.plugin.BatchProcessor [menu = Process > Batch > Macro... , weight = 2.0] [DEBUG] - ij.plugin.MacroInstaller [menu = Plugins > Macros > Install..., weight = 0.0] [DEBUG] - ij.plugin.ZProjector [menu = Image > Stacks > Z Project..., weight = 20.0] [DEBUG] - ij.plugin.filter.LineGraphAnalyzer [menu = Analyze > Tools > Analyze Line Graph, weight = 2.0] [DEBUG] - [BLACKLISTED] ij.plugin.StackEditor("add") [menu = Image > Stacks > Add Slice, weight = 0.0] [DEBUG] - ij.plugin.URLOpener("bat-cochlea-volume.zip") [menu = File > Open Samples > Bat Cochlea Volume (19K), weight = 1.0] [DEBUG] - ij.plugin.HyperStackReducer [menu = Image > Hyperstacks > Reduce Dimensionality..., weight = 3.0] [DEBUG] - ij.plugin.filter.ParticleAnalyzer [menu = Analyze > Analyze Particles..., weight = 1.0] [DEBUG] - [BLACKLISTED] ij.plugin.Converter("32-bit") [menu = Image > Type > 32-bit, weight = 2.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Zoom("orig") [menu = Image > Zoom > Original Scale, weight = 2.0] [DEBUG] - ij.plugin.FFTMath [menu = Process > FFT > FD Math..., weight = 16.0] [DEBUG] - ij.plugin.BrowserLauncher("https://list.nih.gov/archives/imagej.html") [menu = Help > Mailing List..., weight = 4.0] [DEBUG] - [BLACKLISTED] ij.plugin.Converter("16-bit") [menu = Image > Type > 16-bit, weight = 1.0] [DEBUG] - ij.plugin.URLOpener("particles.gif") [menu = File > Open Samples > Particles (75K), weight = 26.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.GaussianBlur [menu = Process > Filters > Gaussian Blur..., weight = 1.0] [DEBUG] - [BLACKLISTED] ij.plugin.StackReverser [menu = Image > Stacks > Tools > Reverse, weight = 3.0] [DEBUG] - ij.plugin.filter.Writer("png") [menu = File > Save As > PNG..., weight = 9.0] [DEBUG] - [BLACKLISTED] imagej.legacy.SwitchToModernMode [menu = Help > Switch to Modern Mode, weight = 43.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("magenta") [menu = Image > Lookup Tables > Magenta, weight = 21.0] [DEBUG] - ij.plugin.ControlPanel [menu = Plugins > Utilities > Control Panel..., weight = 0.0] [DEBUG] - ij.plugin.NewPlugin("text") [menu = File > New > Text Window, weight = 2.0] [DEBUG] - ij.plugin.Selection("ellipse") [menu = Edit > Selection > Fit Ellipse, weight = 5.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Commands("open") [menu = File > Open..., weight = 1.0] [DEBUG] - ij.plugin.WindowOrganizer("tile") [menu = Window > Tile, weight = 3.0] [DEBUG] - ij.plugin.URLOpener("TEM_filter_sample.jpg") [menu = File > Open Samples > TEM Filter (112K), weight = 29.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Binner [menu = Image > Transform > Bin..., weight = 7.0] [DEBUG] - [OVERRIDDEN] ij.plugin.OverlayCommands("options") [menu = Image > Overlay > Overlay Options..., weight = 10.0] [DEBUG] - ij.plugin.NewPlugin("macro") [menu = Plugins > New > Macro, weight = 0.0] [DEBUG] - ij.plugin.Installer [menu = Plugins > Shortcuts > Install Plugin..., weight = 2.0] [DEBUG] - [OVERRIDDEN] ij.plugin.frame.ThresholdAdjuster [menu = Image > Adjust > Threshold..., weight = 3.0] [DEBUG] - ij.plugin.Stack_Statistics [menu = Image > Stacks > Statistics, weight = 24.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("blue") [menu = Image > Lookup Tables > Blue, weight = 19.0] [DEBUG] - ij.plugin.Raw [menu = File > Import > Raw..., weight = 1.0] [DEBUG] - ij.plugin.filter.Writer("gif") [menu = File > Save As > Gif..., weight = 1.0] [DEBUG] - [BLACKLISTED] ij.plugin.Colors [menu = Edit > Options > Colors..., weight = 8.0] [DEBUG] - [BLACKLISTED] ij.plugin.CompositeConverter [menu = Image > Color > Make Composite, weight = 15.0] [DEBUG] - ij.plugin.URLOpener("hela-cells.zip") [menu = File > Open Samples > HeLa Cells (1.3M, 48-bit RGB), weight = 16.0] [DEBUG] - ij.plugin.NewPlugin("macro-tool") [menu = Plugins > New > Macro Tool, weight = 1.0] [DEBUG] - [OVERRIDDEN] ij.plugin.WandToolOptions [menu = Edit > Options > Wand Tool..., weight = 7.0] [DEBUG] - [BLACKLISTED] ij.plugin.Zoom("set") [menu = Image > Zoom > Set... , weight = 5.0] [DEBUG] - ij.plugin.FFT("fft") [menu = Process > FFT > FFT, weight = 0.0] [DEBUG] - ij.plugin.ImagesToStack [menu = Image > Stacks > Images to Stack, weight = 15.0] [DEBUG] - [BLACKLISTED] ij.plugin.frame.RoiManager [menu = Analyze > Tools > ROI Manager..., weight = 4.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("southwest") [menu = Process > Shadows > Southwest, weight = 5.0] [DEBUG] - ij.plugin.URLOpener("bat-cochlea-renderings.zip") [menu = File > Open Samples > Bat Cochlea Renderings (449K), weight = 2.0] [DEBUG] - [BLACKLISTED] ij.plugin.Clipboard("scopy") [menu = Edit > Copy to System, weight = 13.0] [DEBUG] - ij.plugin.filter.RankFilters("variance") [menu = Process > Filters > Variance..., weight = 7.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Commands("close-all") [menu = File > Close All, weight = 17.0] [DEBUG] - ij.plugin.filter.RankFilters("min") [menu = Process > Filters > Minimum..., weight = 4.0] [DEBUG] - [BLACKLISTED] ij.plugin.frame.ColorPicker [menu = Image > Color > Color Picker..., weight = 19.0] [DEBUG] - ij.plugin.RGBStackConverter [menu = Image > Color > Stack to RGB, weight = 14.0] [DEBUG] - ij.plugin.ChannelArranger [menu = Image > Color > Arrange Channels..., weight = 2.0] [DEBUG] - ij.plugin.URLOpener("m51.zip") [menu = File > Open Samples > M51 Galaxy (177K, 16-bits), weight = 22.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Options("line") [menu = Edit > Options > Line Width..., weight = 0.0] [DEBUG] - ij.plugin.filter.RankFilters("median") [menu = Process > Filters > Median..., weight = 2.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.ImageMath("reciprocal") [menu = Process > Math > Reciprocal, weight = 15.0] [DEBUG] - [OVERRIDDEN] ij.plugin.ArrowToolOptions [menu = Edit > Options > Arrow Tool..., weight = 5.0] [DEBUG] - ij.plugin.Clipboard("showsys") [menu = File > New > System Clipboard, weight = 4.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Info [menu = Image > Show Info..., weight = 12.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("ice") [menu = Image > Lookup Tables > Ice, weight = 14.0] [DEBUG] - [OVERRIDDEN] ij.plugin.SpecifyROI [menu = Edit > Selection > Specify..., weight = 26.0] [DEBUG] - ij.plugin.ListVirtualStack [menu = File > Import > Stack From List..., weight = 8.0] [DEBUG] - ij.plugin.Selection("circle") [menu = Edit > Selection > Fit Circle, weight = 4.0] [DEBUG] - ij.plugin.filter.Writer("raw") [menu = File > Save As > Raw Data..., weight = 5.0] [DEBUG] - ij.plugin.Filters3D("var") [menu = Process > Filters > Variance 3D..., weight = 23.0] [DEBUG] - ij.plugin.Selection("inverse") [menu = Edit > Selection > Make Inverse, weight = 8.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Profiler("set") [menu = Edit > Options > Profile Plot Options..., weight = 3.0] [DEBUG] - ij.plugin.BrowserLauncher("http://imagej.nih.gov/ij/docs") [menu = Help > Documentation..., weight = 2.0] [DEBUG] - ij.plugin.Slicer [menu = Image > Stacks > Reslice [/]..., weight = 18.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("set") [menu = Process > Math > Set..., weight = 10.0] [DEBUG] - ij.plugin.filter.XYWriter [menu = File > Save As > XY Coordinates..., weight = 14.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.ImageMath("sqrt") [menu = Process > Math > Square Root, weight = 14.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.Filters("add") [menu = Process > Noise > Add Noise, weight = 0.0] [DEBUG] - ij.plugin.filter.Writer("lut") [menu = File > Save As > LUT..., weight = 12.0] [DEBUG] - ij.plugin.SimpleCommands("table") [menu = File > Import > Table... , weight = 6.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.Binary("close") [menu = Process > Binary > Close-, weight = 15.0] [DEBUG] - ij.plugin.StackInserter [menu = Image > Stacks > Tools > Insert..., weight = 4.0] [DEBUG] - ij.plugin.Selection("restore") [menu = Edit > Selection > Restore Selection, weight = 2.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.ImageMath("abs") [menu = Process > Math > Abs, weight = 17.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("green") [menu = Image > Lookup Tables > Green, weight = 18.0] [DEBUG] - ij.plugin.frame.ContrastAdjuster("balance") [menu = Image > Adjust > Color Balance..., weight = 2.0] [DEBUG] - ij.plugin.BrowserLauncher("http://imagej.nih.gov/ij/notes.html") [menu = Help > ImageJ News..., weight = 1.0] [DEBUG] - [BLACKLISTED] ij.plugin.Hotkeys("install") [menu = Plugins > Shortcuts > Create Shortcut... , weight = 1.0] [DEBUG] - ij.plugin.URLOpener("FluorescentCells.zip") [menu = File > Open Samples > Fluorescent Cells (400K), weight = 13.0] [DEBUG] - ij.plugin.filter.Writer("bmp") [menu = File > Save As > BMP..., weight = 8.0] [DEBUG] - [BLACKLISTED] ij.plugin.Animator("options") [menu = Image > Stacks > Tools > Animation Options..., weight = 22.0] [DEBUG] - ij.plugin.URLOpener("leaf.jpg") [menu = File > Open Samples > Leaf (36K), weight = 17.0] [DEBUG] - ij.plugin.filter.RoiWriter [menu = File > Save As > Selection..., weight = 13.0] [DEBUG] - ij.plugin.Straightener [menu = Edit > Selection > Straighten..., weight = 27.0] [DEBUG] - ij.plugin.URLOpener("LineGraph.jpg") [menu = File > Open Samples > Line Graph (21K), weight = 19.0] [DEBUG] - ij.plugin.URLOpener("Rat_Hippocampal_Neuron.zip") [menu = File > Open Samples > Neuron (1.6M, 5 channels), weight = 23.0] [DEBUG] - ij.plugin.ScaleBar [menu = Analyze > Tools > Scale Bar..., weight = 5.0] [DEBUG] - ij.plugin.OverlayCommands("list") [menu = Image > Overlay > List Elements, weight = 7.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("west") [menu = Process > Shadows > West, weight = 6.0] [DEBUG] - ij.plugin.PluginInstaller [menu = Plugins > Install... , weight = 5.0] [DEBUG] - [BLACKLISTED] ij.plugin.OverlayCommands("to") [menu = Image > Overlay > To ROI Manager, weight = 5.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("south") [menu = Process > Shadows > South, weight = 4.0] [DEBUG] - ij.plugin.Macro_Runner [menu = Plugins > Macros > Run..., weight = 1.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("southeast") [menu = Process > Shadows > Southeast, weight = 3.0] [DEBUG] - ij.plugin.SimpleCommands("reset") [menu = Plugins > Utilities > Reset..., weight = 30.0] [DEBUG] - [BLACKLISTED] ij.plugin.OverlayCommands("image") [menu = Image > Overlay > Add Image..., weight = 1.0] [DEBUG] - ij.plugin.FFT("options") [menu = Process > FFT > FFT Options..., weight = 3.0] [DEBUG] - ij.plugin.Commands("undo") [menu = Edit > Undo, weight = 0.0] [DEBUG] - ij.plugin.BrowserLauncher("http://imagej.nih.gov/ij/developer/macro/functions.html") [menu = Help > Macro Functions..., weight = 18.0] [DEBUG] - ij.plugin.GaussianBlur3D [menu = Process > Filters > Gaussian Blur 3D..., weight = 18.0] [DEBUG] - ij.plugin.StackReducer [menu = Image > Stacks > Tools > Reduce..., weight = 2.0] [DEBUG] - [OVERRIDDEN] ij.plugin.OverlayCommands("flatten") [menu = Image > Overlay > Flatten, weight = 8.0] [DEBUG] - ij.plugin.filter.Analyzer("clear") [menu = Analyze > Clear Results, weight = 5.0] [DEBUG] - ij.plugin.WindowOrganizer("show") [menu = Window > Show All, weight = 0.0] [DEBUG] - ij.plugin.filter.Writer("tiff") [menu = File > Save As > Tiff..., weight = 0.0] [DEBUG] - ij.plugin.BatchConverter [menu = Process > Batch > Convert..., weight = 1.0] [DEBUG] - ij.plugin.BatchMeasure [menu = Process > Batch > Measure..., weight = 0.0] [DEBUG] - [BLACKLISTED] ij.plugin.Selection("none") [menu = Edit > Selection > Select None, weight = 1.0] [DEBUG] - [BLACKLISTED] ij.plugin.Zoom("in") [menu = Image > Zoom > In [+], weight = 0.0] [DEBUG] - ij.plugin.MeasurementsWriter [menu = File > Save As > Results..., weight = 15.0] [DEBUG] - [OVERRIDDEN] ij.plugin.ScreenGrabber("image") [menu = Plugins > Utilities > Capture Image, weight = 16.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Commands("new") [menu = File > New > Image..., weight = 0.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.ImageMath("exp") [menu = Process > Math > Exp, weight = 12.0] [DEBUG] - [BLACKLISTED] ij.plugin.StackReverser [menu = Image > Transform > Flip Z, weight = 2.0] [DEBUG] - ij.plugin.filter.Profiler("plot") [menu = Analyze > Plot Profile, weight = 20.0] [DEBUG] - [BLACKLISTED] ij.plugin.OverlayCommands("from") [menu = Image > Overlay > From ROI Manager, weight = 4.0] [DEBUG] - ij.plugin.frame.LineWidthAdjuster [menu = Image > Adjust > Line Width... , weight = 7.0] [DEBUG] - ij.plugin.NewPlugin("text+dialog") [menu = Plugins > New > Text Window..., weight = 27.0] [DEBUG] - ij.plugin.XYCoordinates [menu = Analyze > Tools > Save XY Coordinates..., weight = 0.0] [DEBUG] - ij.plugin.filter.RankFilters("outliers") [menu = Process > Noise > Remove Outliers..., weight = 14.0] [DEBUG] - [OVERRIDDEN] ij.plugin.frame.Recorder [menu = Plugins > Macros > Record..., weight = 4.0] [DEBUG] - [BLACKLISTED] ij.plugin.Animator("previous") [menu = Image > Stacks > Previous Slice [<], weight = 3.0] [DEBUG] - [BLACKLISTED] ij.plugin.HyperStackConverter("stacktohs") [menu = Image > Hyperstacks > Stack to Hyperstack..., weight = 1.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.ImageMath("macro") [menu = Process > Math > Macro..., weight = 18.0] [DEBUG] - [BLACKLISTED] ij.plugin.AboutBox [menu = Help > About ImageJ..., weight = 42.0] [DEBUG] - ij.plugin.filter.FFTCustomFilter [menu = Process > FFT > Custom Filter..., weight = 15.0] [DEBUG] - ij.plugin.filter.Writer("jpeg") [menu = File > Save As > Jpeg..., weight = 2.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("north") [menu = Process > Shadows > North, weight = 0.0] [DEBUG] - ij.plugin.Filters3D("max") [menu = Process > Filters > Maximum 3D..., weight = 22.0] [DEBUG] - ij.plugin.filter.EDM("watershed") [menu = Process > Binary > Watershed, weight = 41.0] [DEBUG] - ij.plugin.ImageJ_Updater("menus") [menu = Help > Refresh Menus, weight = 30.0] [DEBUG] - ij.plugin.BrowserLauncher("http://imagej.nih.gov/ij/developer/index.html") [menu = Help > Dev. Resources..., weight = 15.0] [DEBUG] - ij.plugin.SubstackMaker [menu = Image > Stacks > Tools > Make Substack..., weight = 6.0] [DEBUG] - ij.plugin.filter.Printer("setup") [menu = File > Page Setup..., weight = 31.0] [DEBUG] - ij.plugin.frame.Fitter [menu = Analyze > Tools > Curve Fitting..., weight = 3.0] [DEBUG] - ij.plugin.Hotkeys("remove") [menu = Plugins > Shortcuts > Remove..., weight = 3.0] [DEBUG] - [BLACKLISTED] ij.plugin.Options("reset") [menu = Edit > Options > Reset... , weight = 26.0] [DEBUG] - ij.plugin.filter.AVI_Writer [menu = File > Save As > AVI... , weight = 7.0] [DEBUG] - ij.plugin.StackWriter [menu = File > Save As > Image Sequence... , weight = 6.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("and") [menu = Process > Math > AND..., weight = 4.0] [DEBUG] - ij.plugin.filter.EDM("points") [menu = Process > Binary > Ultimate Points, weight = 40.0] [DEBUG] - ij.plugin.URLOpener("clown.jpg") [menu = File > Open Samples > Clown (14K), weight = 8.0] [DEBUG] - ij.plugin.filter.Writer("zip") [menu = File > Save As > ZIP..., weight = 4.0] [DEBUG] - ij.plugin.NewPlugin("frame") [menu = Plugins > New > Plugin Frame, weight = 15.0] [DEBUG] - ij.plugin.NewPlugin("plugin") [menu = Plugins > New > Plugin, weight = 13.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("east") [menu = Process > Shadows > East, weight = 2.0] [DEBUG] - ij.plugin.filter.RankFilters("mean") [menu = Process > Filters > Mean..., weight = 3.0] [DEBUG] - ij.plugin.Commands("tab") [menu = Window > Put Behind [tab], weight = 1.0] [DEBUG] - ij.plugin.Selection("band") [menu = Edit > Selection > Make Band..., weight = 25.0] [DEBUG] - ij.plugin.URLOpener("gel.gif") [menu = File > Open Samples > Gel (105K), weight = 15.0] [DEBUG] - ij.plugin.TextReader [menu = File > Import > Text Image... , weight = 3.0] [DEBUG] - ij.plugin.filter.Binary("outline") [menu = Process > Binary > Outline, weight = 26.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("grays") [menu = Image > Lookup Tables > Grays, weight = 13.0] [DEBUG] - ij.plugin.filter.BackgroundSubtracter [menu = Process > Subtract Background..., weight = 23.0] [DEBUG] - ij.plugin.URLOpener("confocal-series.zip") [menu = File > Open Samples > Confocal Series (2.2MB), weight = 9.0] [DEBUG] - ij.plugin.filter.Analyzer [menu = Analyze > Measure, weight = 0.0] [DEBUG] - [OVERRIDDEN] ij.plugin.AppearanceOptions [menu = Edit > Options > Appearance..., weight = 9.0] [DEBUG] - ij.plugin.URLOpener("lena-std.tif") [menu = File > Open Samples > Lena (68K), weight = 18.0] [DEBUG] - ij.plugin.filter.Analyzer("sum") [menu = Analyze > Summarize, weight = 2.0] [DEBUG] - ij.plugin.ContrastEnhancer [menu = Process > Enhance Contrast..., weight = 4.0] [DEBUG] - ij.plugin.NewPlugin("javascript") [menu = Plugins > New > JavaScript, weight = 2.0] [DEBUG] - ij.plugin.SimpleCommands("rtoi") [menu = Image > Transform > Results to Image, weight = 19.0] [DEBUG] - ij.plugin.filter.Analyzer("set") [menu = Analyze > Set Measurements..., weight = 6.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Compiler("options") [menu = Edit > Options > Compiler..., weight = 13.0] [DEBUG] - ij.plugin.URLOpener("Spindly-GFP.zip") [menu = File > Open Samples > Mitosis (26MB, 5D stack), weight = 20.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Commands("close") [menu = File > Close, weight = 16.0] [DEBUG] - ij.plugin.Compiler [menu = Plugins > Compile and Run..., weight = 4.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("nan") [menu = Process > Math > NaN Background, weight = 16.0] [DEBUG] - ij.plugin.FFT("redisplay") [menu = Process > FFT > Redisplay Power Spectrum, weight = 2.0] [DEBUG] - [BLACKLISTED] ij.plugin.Thresholder [menu = Process > Binary > Make Binary, weight = 0.0] [DEBUG] - ij.plugin.SurfacePlotter [menu = Analyze > Surface Plot..., weight = 21.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.LutViewer [menu = Image > Color > Show LUT, weight = 16.0] [DEBUG] - [BLACKLISTED] ij.plugin.Selection("add") [menu = Edit > Selection > Add to Manager, weight = 32.0] [DEBUG] - ij.plugin.filter.RankFilters("masks") [menu = Process > Filters > Show Circular Masks..., weight = 34.0] [DEBUG] - ij.plugin.filter.RankFilters("max") [menu = Process > Filters > Maximum..., weight = 5.0] [DEBUG] - ij.plugin.filter.Writer("pgm") [menu = File > Save As > PGM..., weight = 10.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("gamma") [menu = Process > Math > Gamma..., weight = 9.0] [DEBUG] - ij.plugin.FFT("swap") [menu = Process > FFT > Swap Quadrants, weight = 17.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Filters("smooth") [menu = Process > Smooth, weight = 0.0] [DEBUG] - ij.plugin.filter.RankFilters("nan") [menu = Process > Noise > Remove NaNs..., weight = 15.0] [DEBUG] - [OVERRIDDEN] ij.plugin.frame.Fonts [menu = Edit > Options > Fonts..., weight = 2.0] [DEBUG] - ij.plugin.URLOpener("Dot_Blot.jpg") [menu = File > Open Samples > Dot Blot (7K), weight = 11.0] [DEBUG] - ij.plugin.filter.MaximumFinder [menu = Process > Find Maxima..., weight = 3.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.SaltAndPepper [menu = Process > Noise > Salt and Pepper, weight = 2.0] [DEBUG] - ij.plugin.URLOpener("blobs.gif") [menu = File > Open Samples > Blobs (25K), weight = 3.0] [DEBUG] - [BLACKLISTED] ij.plugin.Zoom("out") [menu = Image > Zoom > Out [-], weight = 1.0] [DEBUG] - [OVERRIDDEN] ij.plugin.frame.SyncWindows [menu = Analyze > Tools > Synchronize Windows, weight = 7.0] [DEBUG] - [OVERRIDDEN] ij.plugin.OverlayCommands("remove") [menu = Image > Overlay > Remove Overlay, weight = 6.0] [DEBUG] - [BLACKLISTED] ij.plugin.Animator("stop") [menu = Image > Stacks > Tools > Stop Animation, weight = 21.0] [DEBUG] - ij.plugin.URLOpener("boats.gif") [menu = File > Open Samples > Boats (356K), weight = 4.0] [DEBUG] - [OVERRIDDEN] ij.plugin.BrowserLauncher [menu = Help > ImageJ Website..., weight = 0.0] [DEBUG] - ij.plugin.LutLoader [menu = File > Import > LUT... , weight = 2.0] [DEBUG] - ij.plugin.SimpleCommands("search") [menu = Plugins > Utilities > Search..., weight = 2.0] [DEBUG] - ij.plugin.Selection("properties") [menu = Edit > Selection > Properties... , weight = 21.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Commands("save") [menu = File > Save, weight = 18.0] [DEBUG] - ij.plugin.URLOpener("t1-rendering.zip") [menu = File > Open Samples > T1 Head Renderings (736K), weight = 28.0] [DEBUG] - ij.plugin.HyperStackMaker [menu = File > New > Hyperstack..., weight = 1.0] [DEBUG] - ij.plugin.filter.Binary("skel") [menu = Process > Binary > Skeletonize, weight = 28.0] [DEBUG] - ij.plugin.filter.Binary("options") [menu = Process > Binary > Options..., weight = 53.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("demo") [menu = Process > Shadows > Shadows Demo, weight = 18.0] [DEBUG] - ij.plugin.FileInfoVirtualStack [menu = File > Import > TIFF Virtual Stack..., weight = 9.0] [DEBUG] - [BLACKLISTED] ij.plugin.filter.Filters("invert") [menu = Edit > Invert, weight = 30.0] [DEBUG] - [OVERRIDDEN] ij.plugin.ScreenGrabber [menu = Plugins > Utilities > Capture Screen, weight = 15.0] [DEBUG] - ij.plugin.NewPlugin("table") [menu = Plugins > New > Table..., weight = 28.0] [DEBUG] - ij.plugin.GroupedZProjector [menu = Image > Stacks > Tools > Grouped Z Project..., weight = 7.0] [DEBUG] - ij.plugin.URLOpener("organ-of-corti.zip") [menu = File > Open Samples > Organ of Corti (2.8M, 4D stack), weight = 25.0] [DEBUG] - ij.plugin.Clipboard("show") [menu = File > New > Internal Clipboard, weight = 3.0] [DEBUG] - ij.plugin.Selection("toline") [menu = Edit > Selection > Area to Line, weight = 30.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Transformer("right") [menu = Image > Transform > Rotate 90 Degrees Right, weight = 3.0] [DEBUG] - ij.plugin.GelAnalyzer("plot") [menu = Analyze > Gels > Plot Lanes, weight = 2.0] [DEBUG] - [OVERRIDDEN] ij.plugin.CommandFinder [menu = Plugins > Utilities > Find Commands..., weight = 1.0] [DEBUG] - [OVERRIDDEN] ij.plugin.frame.Channels [menu = Image > Color > Channels Tool..., weight = 3.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("xor") [menu = Process > Math > XOR..., weight = 6.0] [DEBUG] - [BLACKLISTED] ij.plugin.HyperStackConverter("hstostack") [menu = Image > Hyperstacks > Hyperstack to Stack, weight = 2.0] [DEBUG] - ij.plugin.SimpleCommands("rename") [menu = Image > Rename..., weight = 29.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Options("io") [menu = Edit > Options > Input/Output..., weight = 1.0] [DEBUG] - ij.plugin.Filters3D("min") [menu = Process > Filters > Minimum 3D..., weight = 21.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("fire") [menu = Image > Lookup Tables > Fire, weight = 12.0] [DEBUG] - ij.plugin.Selection("tobox") [menu = Edit > Selection > To Bounding Box, weight = 28.0] [DEBUG] - ij.plugin.Filters3D("mean") [menu = Process > Filters > Mean 3D..., weight = 20.0] [DEBUG] - ij.plugin.Selection("rotate") [menu = Edit > Selection > Rotate..., weight = 23.0] [DEBUG] - ij.plugin.RoiScaler [menu = Edit > Selection > Scale... , weight = 22.0] [DEBUG] - [OVERRIDDEN] ij.plugin.RectToolOptions [menu = Edit > Options > Rounded Rect Tool..., weight = 4.0] [DEBUG] - ij.plugin.NewPlugin("filter") [menu = Plugins > New > Plugin Filter, weight = 14.0] [DEBUG] - ij.plugin.SimpleCommands("itor") [menu = Image > Transform > Image to Results, weight = 18.0] [DEBUG] - ij.plugin.filter.Writer("fits") [menu = File > Save As > FITS..., weight = 11.0] [DEBUG] - ij.plugin.SimpleCommands("import") [menu = File > Import > Results... , weight = 5.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Shadows("northwest") [menu = Process > Shadows > Northwest, weight = 7.0] [DEBUG] - ij.plugin.URLOpener("cardio.dcm.zip") [menu = File > Open Samples > Cardio (768K, RGB DICOM), weight = 6.0] [DEBUG] - ij.plugin.StackMaker [menu = Image > Stacks > Tools > Montage to Stack..., weight = 5.0] [DEBUG] - ij.plugin.AVI_Reader [menu = File > Import > AVI..., weight = 10.0] [DEBUG] - ij.plugin.Projector [menu = Image > Stacks > 3D Project..., weight = 21.0] [DEBUG] - ij.plugin.filter.EDM("voronoi") [menu = Process > Binary > Voronoi, weight = 42.0] [DEBUG] - ij.plugin.Distribution [menu = Analyze > Distribution..., weight = 3.0] [DEBUG] - ij.plugin.Selection("interpolate") [menu = Edit > Selection > Interpolate, weight = 6.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Transformer("left") [menu = Image > Transform > Rotate 90 Degrees Left, weight = 4.0] [DEBUG] - ij.plugin.filter.EDM("edm") [menu = Process > Binary > Distance Map, weight = 39.0] [DEBUG] - [OVERRIDDEN] ij.plugin.CommandLister("shortcuts") [menu = Plugins > Shortcuts > List Shortcuts..., weight = 0.0] [DEBUG] - ij.plugin.URLOpener("Tree_Rings.jpg") [menu = File > Open Samples > Tree Rings (48K), weight = 30.0] [DEBUG] - [BLACKLISTED] ij.plugin.Commands("quit") [menu = File > Quit, weight = 43.0] [DEBUG] - ij.plugin.MontageMaker [menu = Image > Stacks > Make Montage..., weight = 17.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("yellow") [menu = Image > Lookup Tables > Yellow, weight = 22.0] [DEBUG] - ij.plugin.Clipboard("copy") [menu = Edit > Copy, weight = 12.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Colors("point") [menu = Edit > Options > Point Tool..., weight = 6.0] [DEBUG] - ij.plugin.frame.ColorThresholder [menu = Image > Adjust > Color Threshold..., weight = 4.0] [DEBUG] - [BLACKLISTED] ij.plugin.OverlayCommands("hide") [menu = Image > Overlay > Hide Overlay, weight = 2.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("spectrum") [menu = Image > Lookup Tables > Spectrum, weight = 15.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Binary("dilate") [menu = Process > Binary > Dilate, weight = 13.0] [DEBUG] - ij.plugin.filter.Filler("draw") [menu = Edit > Draw, weight = 29.0] [DEBUG] - ij.plugin.filter.UnsharpMask [menu = Process > Filters > Unsharp Mask..., weight = 6.0] [DEBUG] - ij.plugin.Converter("8-bit Color") [menu = Image > Type > 8-bit Color, weight = 3.0] [DEBUG] - ij.plugin.WindowOrganizer("cascade") [menu = Window > Cascade, weight = 2.0] [DEBUG] - ij.plugin.FFT("inverse") [menu = Process > FFT > Inverse FFT, weight = 1.0] [DEBUG] - ij.plugin.EventListener [menu = Plugins > Utilities > Monitor Events..., weight = 3.0] [DEBUG] - ij.plugin.GelAnalyzer("label") [menu = Analyze > Gels > Label Peaks, weight = 5.0] [DEBUG] - ij.plugin.ThreadLister [menu = Plugins > Utilities > Threads..., weight = 28.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Filters("edge") [menu = Process > Find Edges, weight = 2.0] [DEBUG] - ij.plugin.GelAnalyzer("first") [menu = Analyze > Gels > Select First Lane, weight = 0.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Memory [menu = Edit > Options > Memory & Threads..., weight = 11.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("div") [menu = Process > Math > Divide..., weight = 3.0] [DEBUG] - ij.plugin.filter.Filler("clear") [menu = Edit > Clear, weight = 26.0] [DEBUG] - [OVERRIDDEN] ij.plugin.OverlayLabels [menu = Image > Overlay > Labels..., weight = 9.0] [DEBUG] - ij.plugin.frame.MemoryMonitor [menu = Plugins > Utilities > Monitor Memory..., weight = 4.0] [DEBUG] - ij.plugin.filter.ZAxisProfiler [menu = Image > Stacks > Plot Z-axis Profile, weight = 22.0] [DEBUG] - [BLACKLISTED] ij.plugin.LutLoader("redgreen") [menu = Image > Lookup Tables > Red/Green, weight = 23.0] [DEBUG] - ij.plugin.SimpleCommands("remove") [menu = Image > Stacks > Tools > Remove Slice Labels, weight = 9.0] [DEBUG] - ij.plugin.filter.FractalBoxCounter [menu = Analyze > Tools > Fractal Box Count..., weight = 1.0] [DEBUG] - [BLACKLISTED] ij.plugin.Duplicator [menu = Image > Duplicate..., weight = 28.0] [DEBUG] - ij.plugin.LUT_Editor [menu = Image > Color > Edit LUT..., weight = 18.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.ImageMath("sub") [menu = Process > Math > Subtract..., weight = 1.0] [DEBUG] - ij.plugin.Selection("from") [menu = Edit > Selection > Create Selection, weight = 9.0] [DEBUG] - [BLACKLISTED] ij.plugin.Thresholder("mask") [menu = Process > Binary > Convert to Mask, weight = 1.0] [DEBUG] - ij.plugin.URLOpener("ct.dcm.zip") [menu = File > Open Samples > CT (420K, 16-bit DICOM), weight = 10.0] [DEBUG] - ij.plugin.StackEditor("toimages") [menu = Image > Stacks > Stack to Images, weight = 16.0] [DEBUG] - [BLACKLISTED] ij.plugin.Animator("start") [menu = Image > Stacks > Tools > Start Animation [\], weight = 20.0] [DEBUG] - ij.plugin.JavaProperties [menu = Plugins > Utilities > ImageJ Properties..., weight = 27.0] [DEBUG] - [OVERRIDDEN] ij.plugin.LutLoader("cyan") [menu = Image > Lookup Tables > Cyan, weight = 20.0] [DEBUG] - [OVERRIDDEN] ij.plugin.Orthogonal_Views [menu = Image > Stacks > Orthogonal Views, weight = 19.0] [DEBUG] - ij.plugin.Clipboard("paste") [menu = Edit > Paste, weight = 14.0] [DEBUG] - [OVERRIDDEN] ij.plugin.filter.Translator [menu = Image > Transform > Translate..., weight = 6.0] [INFO] Found 243 legacy plugins (plus 145 ignored). [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = menu='Process > Noise > Despeckle', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='despeckle', className='ij.plugin.filter.RankFilters' items[1] = menu='Plugins > Macros > Startup Macros...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='startup', className='ij.plugin.Commands' items[2] = menu='File > Import > XY Coordinates... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.XY_Reader' items[3] = menu='Image > Lookup Tables > Invert LUT', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='invert', className='ij.plugin.LutLoader' items[4] = menu='Image > Stacks > Tools > Concatenate...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Concatenator' items[5] = menu='File > Open Samples > MRI Stack (528K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='mri-stack.zip', className='ij.plugin.URLOpener' items[6] = menu='File > Open Samples > Cache Sample Images ', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='cache', className='ij.plugin.URLOpener' items[7] = menu='Analyze > Gels > Gel Analyzer Options...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='options', className='ij.plugin.GelAnalyzer' items[8] = menu='Image > Adjust > Canvas Size...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.CanvasResizer' items[9] = menu='Edit > Selection > Create Mask', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='mask', className='ij.plugin.Selection' items[10] = menu='Image > Transform > Rotate... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.Rotator' items[11] = menu='File > Open Samples > Nile Bend (1.9M)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='NileBend.jpg', className='ij.plugin.URLOpener' items[12] = menu='Image > Lookup Tables > Apply LUT', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.LutApplier' items[13] = menu='Edit > Selection > Line to Area', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='toarea', className='ij.plugin.Selection' items[14] = menu='Edit > Paste Control...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.PasteController' items[15] = menu='Image > Scale...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Scaler' items[16] = menu='File > Open Samples > Fly Brain (1MB)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='flybrain.zip', className='ij.plugin.URLOpener' items[17] = menu='Analyze > Gels > Reset', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='reset', className='ij.plugin.GelAnalyzer' items[18] = menu='File > Save As > Text...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.TextWriter' items[19] = menu='Edit > Selection > Image to Selection...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='image-roi', className='ij.plugin.OverlayCommands' items[20] = menu='Image > Adjust > Window/Level...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='wl', className='ij.plugin.frame.ContrastAdjuster' items[21] = menu='Help > Plugins...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/plugins', className='ij.plugin.BrowserLauncher' items[22] = menu='File > Open Samples > AuPbSn 40 (56K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='AuPbSn40.jpg', className='ij.plugin.URLOpener' items[23] = menu='File > Import > URL...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.URLOpener' items[24] = menu='Image > Adjust > Size...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Resizer' items[25] = menu='Image > Type > HSB Stack', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='HSB Stack', className='ij.plugin.Converter' items[26] = menu='Help > Installation...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='install', className='ij.plugin.SimpleCommands' items[27] = menu='Edit > Selection > Fit Spline', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='spline', className='ij.plugin.Selection' items[28] = menu='Image > Stacks > Label...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.StackLabeler' items[29] = menu='File > Save As > Text Image...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='text', className='ij.plugin.filter.Writer' items[30] = menu='File > Import > Image Sequence...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.FolderOpener' items[31] = menu='Process > Filters > Median 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='median', className='ij.plugin.Filters3D' items[32] = menu='Process > FFT > Bandpass Filter...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.FFTFilter' items[33] = menu='Analyze > Gels > Select Next Lane', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='next', className='ij.plugin.GelAnalyzer' items[34] = menu='Analyze > Set Scale...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.ScaleDialog' items[35] = menu='File > Print...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='print', className='ij.plugin.filter.Printer' items[36] = menu='Process > Batch > Virtual Stack...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='stack', className='ij.plugin.BatchProcessor' items[37] = menu='File > Open Samples > Embryos (42K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='embryos.jpg', className='ij.plugin.URLOpener' items[38] = menu='Analyze > Calibrate...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.Calibrator' items[39] = menu='Process > Binary > Fill Holes', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='fill', className='ij.plugin.filter.Binary' items[40] = menu='Edit > Selection > Convex Hull', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='hull', className='ij.plugin.Selection' items[41] = menu='Analyze > Tools > Calibration Bar...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.CalibrationBar' items[42] = menu='Edit > Selection > Enlarge...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.RoiEnlarger' items[43] = menu='File > Open Samples > T1 Head (2.4M, 16-bits)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='t1-head.zip', className='ij.plugin.URLOpener' items[44] = menu='Image > Stacks > Tools > Set Label...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='set', className='ij.plugin.SimpleCommands' items[45] = menu='File > Open Samples > Cell Colony (31K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Cell_Colony.jpg', className='ij.plugin.URLOpener' items[46] = menu='Image > Type > RGB Stack', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='RGB Stack', className='ij.plugin.Converter' items[47] = menu='Analyze > Gels > Re-plot Lanes', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='replot', className='ij.plugin.GelAnalyzer' items[48] = menu='File > Open Samples > Bridge (174K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='bridge.gif', className='ij.plugin.URLOpener' items[49] = menu='Analyze > Label', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='label', className='ij.plugin.filter.Filler' items[50] = menu='Edit > Cut', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='cut', className='ij.plugin.Clipboard' items[51] = menu='Image > Properties...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.ImageProperties' items[52] = menu='Analyze > Histogram', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Histogram' items[53] = menu='Image > Stacks > Tools > Combine...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackCombiner' items[54] = menu='File > Import > Text File... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.TextFileReader' items[55] = menu='Image > Color > Display LUTs', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='display', className='ij.plugin.SimpleCommands' items[56] = menu='Image > Hyperstacks > New Hyperstack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.HyperStackMaker' items[57] = menu='Help > Macros...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/macros/', className='ij.plugin.BrowserLauncher' items[58] = menu='Image > Type > RGB Color', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='RGB Color', className='ij.plugin.Converter' items[59] = menu='Help > About Plugins > About This Submenu...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='about', className='ij.plugin.SimpleCommands' items[60] = menu='Edit > Clear Outside', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='outside', className='ij.plugin.filter.Filler' items[61] = menu='File > Open Next', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.NextImageOpener' items[62] = menu='Process > Filters > Convolve...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.Convolver' items[63] = menu='Image > Color > Split Channels', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ChannelSplitter' items[64] = menu='Image > Color > Merge Channels...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.RGBStackMerge' items[65] = menu='Plugins > Macros > Edit...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='edit', className='ij.plugin.Compiler' items[66] = menu='Plugins > New > Plugin Tool', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='plugin-tool', className='ij.plugin.NewPlugin' items[67] = menu='Process > Batch > Macro... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.BatchProcessor' items[68] = menu='Plugins > Macros > Install...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.MacroInstaller' items[69] = menu='Image > Stacks > Z Project...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ZProjector' items[70] = menu='Analyze > Tools > Analyze Line Graph', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.LineGraphAnalyzer' items[71] = menu='File > Open Samples > Bat Cochlea Volume (19K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='bat-cochlea-volume.zip', className='ij.plugin.URLOpener' items[72] = menu='Image > Hyperstacks > Reduce Dimensionality...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.HyperStackReducer' items[73] = menu='Analyze > Analyze Particles...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.ParticleAnalyzer' items[74] = menu='Process > FFT > FD Math...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.FFTMath' items[75] = menu='Help > Mailing List...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='https://list.nih.gov/archives/imagej.html', className='ij.plugin.BrowserLauncher' items[76] = menu='File > Open Samples > Particles (75K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='particles.gif', className='ij.plugin.URLOpener' items[77] = menu='File > Save As > PNG...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='png', className='ij.plugin.filter.Writer' items[78] = menu='Plugins > Utilities > Control Panel...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ControlPanel' items[79] = menu='File > New > Text Window', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='text', className='ij.plugin.NewPlugin' items[80] = menu='Edit > Selection > Fit Ellipse', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='ellipse', className='ij.plugin.Selection' items[81] = menu='Window > Tile', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='tile', className='ij.plugin.WindowOrganizer' items[82] = menu='File > Open Samples > TEM Filter (112K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='TEM_filter_sample.jpg', className='ij.plugin.URLOpener' items[83] = menu='Plugins > New > Macro', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='macro', className='ij.plugin.NewPlugin' items[84] = menu='Plugins > Shortcuts > Install Plugin...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Installer' items[85] = menu='Image > Stacks > Statistics', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Stack_Statistics' items[86] = menu='File > Import > Raw...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Raw' items[87] = menu='File > Save As > Gif...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='gif', className='ij.plugin.filter.Writer' items[88] = menu='File > Open Samples > HeLa Cells (1.3M, 48-bit RGB)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='hela-cells.zip', className='ij.plugin.URLOpener' items[89] = menu='Plugins > New > Macro Tool', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='macro-tool', className='ij.plugin.NewPlugin' items[90] = menu='Process > FFT > FFT', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='fft', className='ij.plugin.FFT' items[91] = menu='Image > Stacks > Images to Stack', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ImagesToStack' items[92] = menu='File > Open Samples > Bat Cochlea Renderings (449K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='bat-cochlea-renderings.zip', className='ij.plugin.URLOpener' items[93] = menu='Process > Filters > Variance...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='variance', className='ij.plugin.filter.RankFilters' items[94] = menu='Process > Filters > Minimum...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='min', className='ij.plugin.filter.RankFilters' items[95] = menu='Image > Color > Stack to RGB', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.RGBStackConverter' items[96] = menu='Image > Color > Arrange Channels...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ChannelArranger' items[97] = menu='File > Open Samples > M51 Galaxy (177K, 16-bits)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='m51.zip', className='ij.plugin.URLOpener' items[98] = menu='Process > Filters > Median...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='median', className='ij.plugin.filter.RankFilters' items[99] = menu='File > New > System Clipboard', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='showsys', className='ij.plugin.Clipboard' items[100] = menu='File > Import > Stack From List...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ListVirtualStack' items[101] = menu='Edit > Selection > Fit Circle', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='circle', className='ij.plugin.Selection' items[102] = menu='File > Save As > Raw Data...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='raw', className='ij.plugin.filter.Writer' items[103] = menu='Process > Filters > Variance 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='var', className='ij.plugin.Filters3D' items[104] = menu='Edit > Selection > Make Inverse', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='inverse', className='ij.plugin.Selection' items[105] = menu='Help > Documentation...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/docs', className='ij.plugin.BrowserLauncher' items[106] = menu='Image > Stacks > Reslice [/]...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Slicer' items[107] = menu='File > Save As > XY Coordinates...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.XYWriter' items[108] = menu='File > Save As > LUT...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='lut', className='ij.plugin.filter.Writer' items[109] = menu='File > Import > Table... ', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='table', className='ij.plugin.SimpleCommands' items[110] = menu='Image > Stacks > Tools > Insert...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackInserter' items[111] = menu='Edit > Selection > Restore Selection', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='restore', className='ij.plugin.Selection' items[112] = menu='Image > Adjust > Color Balance...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='balance', className='ij.plugin.frame.ContrastAdjuster' items[113] = menu='Help > ImageJ News...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/notes.html', className='ij.plugin.BrowserLauncher' items[114] = menu='File > Open Samples > Fluorescent Cells (400K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='FluorescentCells.zip', className='ij.plugin.URLOpener' items[115] = menu='File > Save As > BMP...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='bmp', className='ij.plugin.filter.Writer' items[116] = menu='File > Open Samples > Leaf (36K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='leaf.jpg', className='ij.plugin.URLOpener' items[117] = menu='File > Save As > Selection...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.RoiWriter' items[118] = menu='Edit > Selection > Straighten...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Straightener' items[119] = menu='File > Open Samples > Line Graph (21K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='LineGraph.jpg', className='ij.plugin.URLOpener' items[120] = menu='File > Open Samples > Neuron (1.6M, 5 channels)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Rat_Hippocampal_Neuron.zip', className='ij.plugin.URLOpener' items[121] = menu='Analyze > Tools > Scale Bar...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ScaleBar' items[122] = menu='Image > Overlay > List Elements', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='list', className='ij.plugin.OverlayCommands' items[123] = menu='Plugins > Install... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.PluginInstaller' items[124] = menu='Plugins > Macros > Run...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Macro_Runner' items[125] = menu='Plugins > Utilities > Reset...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='reset', className='ij.plugin.SimpleCommands' items[126] = menu='Process > FFT > FFT Options...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='options', className='ij.plugin.FFT' items[127] = menu='Edit > Undo', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='undo', className='ij.plugin.Commands' items[128] = menu='Help > Macro Functions...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/developer/macro/functions.html', className='ij.plugin.BrowserLauncher' items[129] = menu='Process > Filters > Gaussian Blur 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.GaussianBlur3D' items[130] = menu='Image > Stacks > Tools > Reduce...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackReducer' items[131] = menu='Analyze > Clear Results', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='clear', className='ij.plugin.filter.Analyzer' items[132] = menu='Window > Show All', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='show', className='ij.plugin.WindowOrganizer' items[133] = menu='File > Save As > Tiff...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='tiff', className='ij.plugin.filter.Writer' items[134] = menu='Process > Batch > Convert...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.BatchConverter' items[135] = menu='Process > Batch > Measure...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.BatchMeasure' items[136] = menu='File > Save As > Results...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.MeasurementsWriter' items[137] = menu='Analyze > Plot Profile', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='plot', className='ij.plugin.filter.Profiler' items[138] = menu='Image > Adjust > Line Width... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.LineWidthAdjuster' items[139] = menu='Plugins > New > Text Window...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='text+dialog', className='ij.plugin.NewPlugin' items[140] = menu='Analyze > Tools > Save XY Coordinates...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.XYCoordinates' items[141] = menu='Process > Noise > Remove Outliers...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='outliers', className='ij.plugin.filter.RankFilters' items[142] = menu='Process > FFT > Custom Filter...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.FFTCustomFilter' items[143] = menu='File > Save As > Jpeg...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='jpeg', className='ij.plugin.filter.Writer' items[144] = menu='Process > Filters > Maximum 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='max', className='ij.plugin.Filters3D' items[145] = menu='Process > Binary > Watershed', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='watershed', className='ij.plugin.filter.EDM' items[146] = menu='Help > Refresh Menus', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='menus', className='ij.plugin.ImageJ_Updater' items[147] = menu='Help > Dev. Resources...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/developer/index.html', className='ij.plugin.BrowserLauncher' items[148] = menu='Image > Stacks > Tools > Make Substack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.SubstackMaker' items[149] = menu='File > Page Setup...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='setup', className='ij.plugin.filter.Printer' items[150] = menu='Analyze > Tools > Curve Fitting...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.Fitter' items[151] = menu='Plugins > Shortcuts > Remove...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='remove', className='ij.plugin.Hotkeys' items[152] = menu='File > Save As > AVI... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.AVI_Writer' items[153] = menu='File > Save As > Image Sequence... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackWriter' items[154] = menu='Process > Binary > Ultimate Points', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='points', className='ij.plugin.filter.EDM' items[155] = menu='File > Open Samples > Clown (14K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='clown.jpg', className='ij.plugin.URLOpener' items[156] = menu='File > Save As > ZIP...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='zip', className='ij.plugin.filter.Writer' items[157] = menu='Plugins > New > Plugin Frame', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='frame', className='ij.plugin.NewPlugin' items[158] = menu='Plugins > New > Plugin', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='plugin', className='ij.plugin.NewPlugin' items[159] = menu='Process > Filters > Mean...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='mean', className='ij.plugin.filter.RankFilters' items[160] = menu='Window > Put Behind [tab]', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='tab', className='ij.plugin.Commands' items[161] = menu='Edit > Selection > Make Band...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='band', className='ij.plugin.Selection' items[162] = menu='File > Open Samples > Gel (105K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='gel.gif', className='ij.plugin.URLOpener' items[163] = menu='File > Import > Text Image... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.TextReader' items[164] = menu='Process > Binary > Outline', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='outline', className='ij.plugin.filter.Binary' items[165] = menu='Process > Subtract Background...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.BackgroundSubtracter' items[166] = menu='File > Open Samples > Confocal Series (2.2MB)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='confocal-series.zip', className='ij.plugin.URLOpener' items[167] = menu='Analyze > Measure', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.Analyzer' items[168] = menu='File > Open Samples > Lena (68K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='lena-std.tif', className='ij.plugin.URLOpener' items[169] = menu='Analyze > Summarize', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='sum', className='ij.plugin.filter.Analyzer' items[170] = menu='Process > Enhance Contrast...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ContrastEnhancer' items[171] = menu='Plugins > New > JavaScript', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='javascript', className='ij.plugin.NewPlugin' items[172] = menu='Image > Transform > Results to Image', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='rtoi', className='ij.plugin.SimpleCommands' items[173] = menu='Analyze > Set Measurements...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='set', className='ij.plugin.filter.Analyzer' items[174] = menu='File > Open Samples > Mitosis (26MB, 5D stack)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Spindly-GFP.zip', className='ij.plugin.URLOpener' items[175] = menu='Plugins > Compile and Run...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Compiler' items[176] = menu='Process > FFT > Redisplay Power Spectrum', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='redisplay', className='ij.plugin.FFT' items[177] = menu='Analyze > Surface Plot...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.SurfacePlotter' items[178] = menu='Process > Filters > Show Circular Masks...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='masks', className='ij.plugin.filter.RankFilters' items[179] = menu='Process > Filters > Maximum...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='max', className='ij.plugin.filter.RankFilters' items[180] = menu='File > Save As > PGM...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='pgm', className='ij.plugin.filter.Writer' items[181] = menu='Process > FFT > Swap Quadrants', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='swap', className='ij.plugin.FFT' items[182] = menu='Process > Noise > Remove NaNs...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='nan', className='ij.plugin.filter.RankFilters' items[183] = menu='File > Open Samples > Dot Blot (7K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Dot_Blot.jpg', className='ij.plugin.URLOpener' items[184] = menu='Process > Find Maxima...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.MaximumFinder' items[185] = menu='File > Open Samples > Blobs (25K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='blobs.gif', className='ij.plugin.URLOpener' items[186] = menu='File > Open Samples > Boats (356K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='boats.gif', className='ij.plugin.URLOpener' items[187] = menu='File > Import > LUT... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.LutLoader' items[188] = menu='Plugins > Utilities > Search...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='search', className='ij.plugin.SimpleCommands' items[189] = menu='Edit > Selection > Properties... ', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='properties', className='ij.plugin.Selection' items[190] = menu='File > Open Samples > T1 Head Renderings (736K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='t1-rendering.zip', className='ij.plugin.URLOpener' items[191] = menu='File > New > Hyperstack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.HyperStackMaker' items[192] = menu='Process > Binary > Skeletonize', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='skel', className='ij.plugin.filter.Binary' items[193] = menu='Process > Binary > Options...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='options', className='ij.plugin.filter.Binary' items[194] = menu='File > Import > TIFF Virtual Stack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.FileInfoVirtualStack' items[195] = menu='Plugins > New > Table...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='table', className='ij.plugin.NewPlugin' items[196] = menu='Image > Stacks > Tools > Grouped Z Project...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.GroupedZProjector' items[197] = menu='File > Open Samples > Organ of Corti (2.8M, 4D stack)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='organ-of-corti.zip', className='ij.plugin.URLOpener' items[198] = menu='File > New > Internal Clipboard', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='show', className='ij.plugin.Clipboard' items[199] = menu='Edit > Selection > Area to Line', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='toline', className='ij.plugin.Selection' items[200] = menu='Analyze > Gels > Plot Lanes', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='plot', className='ij.plugin.GelAnalyzer' items[201] = menu='Image > Rename...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='rename', className='ij.plugin.SimpleCommands' items[202] = menu='Process > Filters > Minimum 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='min', className='ij.plugin.Filters3D' items[203] = menu='Edit > Selection > To Bounding Box', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='tobox', className='ij.plugin.Selection' items[204] = menu='Process > Filters > Mean 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='mean', className='ij.plugin.Filters3D' items[205] = menu='Edit > Selection > Rotate...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='rotate', className='ij.plugin.Selection' items[206] = menu='Edit > Selection > Scale... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.RoiScaler' items[207] = menu='Plugins > New > Plugin Filter', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='filter', className='ij.plugin.NewPlugin' items[208] = menu='Image > Transform > Image to Results', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='itor', className='ij.plugin.SimpleCommands' items[209] = menu='File > Save As > FITS...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='fits', className='ij.plugin.filter.Writer' items[210] = menu='File > Import > Results... ', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='import', className='ij.plugin.SimpleCommands' items[211] = menu='File > Open Samples > Cardio (768K, RGB DICOM)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='cardio.dcm.zip', className='ij.plugin.URLOpener' items[212] = menu='Image > Stacks > Tools > Montage to Stack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackMaker' items[213] = menu='File > Import > AVI...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.AVI_Reader' items[214] = menu='Image > Stacks > 3D Project...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Projector' items[215] = menu='Process > Binary > Voronoi', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='voronoi', className='ij.plugin.filter.EDM' items[216] = menu='Analyze > Distribution...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Distribution' items[217] = menu='Edit > Selection > Interpolate', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='interpolate', className='ij.plugin.Selection' items[218] = menu='Process > Binary > Distance Map', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='edm', className='ij.plugin.filter.EDM' items[219] = menu='File > Open Samples > Tree Rings (48K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Tree_Rings.jpg', className='ij.plugin.URLOpener' items[220] = menu='Image > Stacks > Make Montage...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.MontageMaker' items[221] = menu='Edit > Copy', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='copy', className='ij.plugin.Clipboard' items[222] = menu='Image > Adjust > Color Threshold...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.ColorThresholder' items[223] = menu='Edit > Draw', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='draw', className='ij.plugin.filter.Filler' items[224] = menu='Process > Filters > Unsharp Mask...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.UnsharpMask' items[225] = menu='Image > Type > 8-bit Color', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='8-bit Color', className='ij.plugin.Converter' items[226] = menu='Window > Cascade', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='cascade', className='ij.plugin.WindowOrganizer' items[227] = menu='Process > FFT > Inverse FFT', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='inverse', className='ij.plugin.FFT' items[228] = menu='Plugins > Utilities > Monitor Events...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.EventListener' items[229] = menu='Analyze > Gels > Label Peaks', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='label', className='ij.plugin.GelAnalyzer' items[230] = menu='Plugins > Utilities > Threads...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ThreadLister' items[231] = menu='Analyze > Gels > Select First Lane', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='first', className='ij.plugin.GelAnalyzer' items[232] = menu='Edit > Clear', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='clear', className='ij.plugin.filter.Filler' items[233] = menu='Plugins > Utilities > Monitor Memory...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.MemoryMonitor' items[234] = menu='Image > Stacks > Plot Z-axis Profile', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.ZAxisProfiler' items[235] = menu='Image > Stacks > Tools > Remove Slice Labels', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='remove', className='ij.plugin.SimpleCommands' items[236] = menu='Analyze > Tools > Fractal Box Count...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.FractalBoxCounter' items[237] = menu='Image > Color > Edit LUT...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.LUT_Editor' items[238] = menu='Edit > Selection > Create Selection', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='from', className='ij.plugin.Selection' items[239] = menu='File > Open Samples > CT (420K, 16-bit DICOM)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='ct.dcm.zip', className='ij.plugin.URLOpener' items[240] = menu='Image > Stacks > Stack to Images', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='toimages', className='ij.plugin.StackEditor' items[241] = menu='Plugins > Utilities > ImageJ Properties...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.JavaProperties' items[242] = menu='Edit > Paste', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='paste', className='ij.plugin.Clipboard',null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = menu='Process > Noise > Despeckle', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='despeckle', className='ij.plugin.filter.RankFilters' items[1] = menu='Plugins > Macros > Startup Macros...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='startup', className='ij.plugin.Commands' items[2] = menu='File > Import > XY Coordinates... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.XY_Reader' items[3] = menu='Image > Lookup Tables > Invert LUT', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='invert', className='ij.plugin.LutLoader' items[4] = menu='Image > Stacks > Tools > Concatenate...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Concatenator' items[5] = menu='File > Open Samples > MRI Stack (528K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='mri-stack.zip', className='ij.plugin.URLOpener' items[6] = menu='File > Open Samples > Cache Sample Images ', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='cache', className='ij.plugin.URLOpener' items[7] = menu='Analyze > Gels > Gel Analyzer Options...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='options', className='ij.plugin.GelAnalyzer' items[8] = menu='Image > Adjust > Canvas Size...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.CanvasResizer' items[9] = menu='Edit > Selection > Create Mask', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='mask', className='ij.plugin.Selection' items[10] = menu='Image > Transform > Rotate... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.Rotator' items[11] = menu='File > Open Samples > Nile Bend (1.9M)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='NileBend.jpg', className='ij.plugin.URLOpener' items[12] = menu='Image > Lookup Tables > Apply LUT', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.LutApplier' items[13] = menu='Edit > Selection > Line to Area', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='toarea', className='ij.plugin.Selection' items[14] = menu='Edit > Paste Control...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.PasteController' items[15] = menu='Image > Scale...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Scaler' items[16] = menu='File > Open Samples > Fly Brain (1MB)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='flybrain.zip', className='ij.plugin.URLOpener' items[17] = menu='Analyze > Gels > Reset', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='reset', className='ij.plugin.GelAnalyzer' items[18] = menu='File > Save As > Text...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.TextWriter' items[19] = menu='Edit > Selection > Image to Selection...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='image-roi', className='ij.plugin.OverlayCommands' items[20] = menu='Image > Adjust > Window/Level...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='wl', className='ij.plugin.frame.ContrastAdjuster' items[21] = menu='Help > Plugins...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/plugins', className='ij.plugin.BrowserLauncher' items[22] = menu='File > Open Samples > AuPbSn 40 (56K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='AuPbSn40.jpg', className='ij.plugin.URLOpener' items[23] = menu='File > Import > URL...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.URLOpener' items[24] = menu='Image > Adjust > Size...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Resizer' items[25] = menu='Image > Type > HSB Stack', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='HSB Stack', className='ij.plugin.Converter' items[26] = menu='Help > Installation...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='install', className='ij.plugin.SimpleCommands' items[27] = menu='Edit > Selection > Fit Spline', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='spline', className='ij.plugin.Selection' items[28] = menu='Image > Stacks > Label...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.StackLabeler' items[29] = menu='File > Save As > Text Image...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='text', className='ij.plugin.filter.Writer' items[30] = menu='File > Import > Image Sequence...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.FolderOpener' items[31] = menu='Process > Filters > Median 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='median', className='ij.plugin.Filters3D' items[32] = menu='Process > FFT > Bandpass Filter...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.FFTFilter' items[33] = menu='Analyze > Gels > Select Next Lane', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='next', className='ij.plugin.GelAnalyzer' items[34] = menu='Analyze > Set Scale...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.ScaleDialog' items[35] = menu='File > Print...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='print', className='ij.plugin.filter.Printer' items[36] = menu='Process > Batch > Virtual Stack...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='stack', className='ij.plugin.BatchProcessor' items[37] = menu='File > Open Samples > Embryos (42K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='embryos.jpg', className='ij.plugin.URLOpener' items[38] = menu='Analyze > Calibrate...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.Calibrator' items[39] = menu='Process > Binary > Fill Holes', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='fill', className='ij.plugin.filter.Binary' items[40] = menu='Edit > Selection > Convex Hull', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='hull', className='ij.plugin.Selection' items[41] = menu='Analyze > Tools > Calibration Bar...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.CalibrationBar' items[42] = menu='Edit > Selection > Enlarge...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.RoiEnlarger' items[43] = menu='File > Open Samples > T1 Head (2.4M, 16-bits)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='t1-head.zip', className='ij.plugin.URLOpener' items[44] = menu='Image > Stacks > Tools > Set Label...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='set', className='ij.plugin.SimpleCommands' items[45] = menu='File > Open Samples > Cell Colony (31K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Cell_Colony.jpg', className='ij.plugin.URLOpener' items[46] = menu='Image > Type > RGB Stack', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='RGB Stack', className='ij.plugin.Converter' items[47] = menu='Analyze > Gels > Re-plot Lanes', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='replot', className='ij.plugin.GelAnalyzer' items[48] = menu='File > Open Samples > Bridge (174K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='bridge.gif', className='ij.plugin.URLOpener' items[49] = menu='Analyze > Label', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='label', className='ij.plugin.filter.Filler' items[50] = menu='Edit > Cut', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='cut', className='ij.plugin.Clipboard' items[51] = menu='Image > Properties...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.ImageProperties' items[52] = menu='Analyze > Histogram', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Histogram' items[53] = menu='Image > Stacks > Tools > Combine...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackCombiner' items[54] = menu='File > Import > Text File... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.TextFileReader' items[55] = menu='Image > Color > Display LUTs', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='display', className='ij.plugin.SimpleCommands' items[56] = menu='Image > Hyperstacks > New Hyperstack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.HyperStackMaker' items[57] = menu='Help > Macros...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/macros/', className='ij.plugin.BrowserLauncher' items[58] = menu='Image > Type > RGB Color', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='RGB Color', className='ij.plugin.Converter' items[59] = menu='Help > About Plugins > About This Submenu...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='about', className='ij.plugin.SimpleCommands' items[60] = menu='Edit > Clear Outside', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='outside', className='ij.plugin.filter.Filler' items[61] = menu='File > Open Next', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.NextImageOpener' items[62] = menu='Process > Filters > Convolve...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.Convolver' items[63] = menu='Image > Color > Split Channels', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ChannelSplitter' items[64] = menu='Image > Color > Merge Channels...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.RGBStackMerge' items[65] = menu='Plugins > Macros > Edit...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='edit', className='ij.plugin.Compiler' items[66] = menu='Plugins > New > Plugin Tool', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='plugin-tool', className='ij.plugin.NewPlugin' items[67] = menu='Process > Batch > Macro... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.BatchProcessor' items[68] = menu='Plugins > Macros > Install...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.MacroInstaller' items[69] = menu='Image > Stacks > Z Project...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ZProjector' items[70] = menu='Analyze > Tools > Analyze Line Graph', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.LineGraphAnalyzer' items[71] = menu='File > Open Samples > Bat Cochlea Volume (19K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='bat-cochlea-volume.zip', className='ij.plugin.URLOpener' items[72] = menu='Image > Hyperstacks > Reduce Dimensionality...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.HyperStackReducer' items[73] = menu='Analyze > Analyze Particles...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.ParticleAnalyzer' items[74] = menu='Process > FFT > FD Math...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.FFTMath' items[75] = menu='Help > Mailing List...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='https://list.nih.gov/archives/imagej.html', className='ij.plugin.BrowserLauncher' items[76] = menu='File > Open Samples > Particles (75K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='particles.gif', className='ij.plugin.URLOpener' items[77] = menu='File > Save As > PNG...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='png', className='ij.plugin.filter.Writer' items[78] = menu='Plugins > Utilities > Control Panel...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ControlPanel' items[79] = menu='File > New > Text Window', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='text', className='ij.plugin.NewPlugin' items[80] = menu='Edit > Selection > Fit Ellipse', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='ellipse', className='ij.plugin.Selection' items[81] = menu='Window > Tile', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='tile', className='ij.plugin.WindowOrganizer' items[82] = menu='File > Open Samples > TEM Filter (112K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='TEM_filter_sample.jpg', className='ij.plugin.URLOpener' items[83] = menu='Plugins > New > Macro', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='macro', className='ij.plugin.NewPlugin' items[84] = menu='Plugins > Shortcuts > Install Plugin...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Installer' items[85] = menu='Image > Stacks > Statistics', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Stack_Statistics' items[86] = menu='File > Import > Raw...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Raw' items[87] = menu='File > Save As > Gif...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='gif', className='ij.plugin.filter.Writer' items[88] = menu='File > Open Samples > HeLa Cells (1.3M, 48-bit RGB)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='hela-cells.zip', className='ij.plugin.URLOpener' items[89] = menu='Plugins > New > Macro Tool', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='macro-tool', className='ij.plugin.NewPlugin' items[90] = menu='Process > FFT > FFT', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='fft', className='ij.plugin.FFT' items[91] = menu='Image > Stacks > Images to Stack', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ImagesToStack' items[92] = menu='File > Open Samples > Bat Cochlea Renderings (449K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='bat-cochlea-renderings.zip', className='ij.plugin.URLOpener' items[93] = menu='Process > Filters > Variance...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='variance', className='ij.plugin.filter.RankFilters' items[94] = menu='Process > Filters > Minimum...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='min', className='ij.plugin.filter.RankFilters' items[95] = menu='Image > Color > Stack to RGB', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.RGBStackConverter' items[96] = menu='Image > Color > Arrange Channels...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ChannelArranger' items[97] = menu='File > Open Samples > M51 Galaxy (177K, 16-bits)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='m51.zip', className='ij.plugin.URLOpener' items[98] = menu='Process > Filters > Median...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='median', className='ij.plugin.filter.RankFilters' items[99] = menu='File > New > System Clipboard', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='showsys', className='ij.plugin.Clipboard' items[100] = menu='File > Import > Stack From List...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ListVirtualStack' items[101] = menu='Edit > Selection > Fit Circle', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='circle', className='ij.plugin.Selection' items[102] = menu='File > Save As > Raw Data...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='raw', className='ij.plugin.filter.Writer' items[103] = menu='Process > Filters > Variance 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='var', className='ij.plugin.Filters3D' items[104] = menu='Edit > Selection > Make Inverse', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='inverse', className='ij.plugin.Selection' items[105] = menu='Help > Documentation...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/docs', className='ij.plugin.BrowserLauncher' items[106] = menu='Image > Stacks > Reslice [/]...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Slicer' items[107] = menu='File > Save As > XY Coordinates...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.XYWriter' items[108] = menu='File > Save As > LUT...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='lut', className='ij.plugin.filter.Writer' items[109] = menu='File > Import > Table... ', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='table', className='ij.plugin.SimpleCommands' items[110] = menu='Image > Stacks > Tools > Insert...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackInserter' items[111] = menu='Edit > Selection > Restore Selection', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='restore', className='ij.plugin.Selection' items[112] = menu='Image > Adjust > Color Balance...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='balance', className='ij.plugin.frame.ContrastAdjuster' items[113] = menu='Help > ImageJ News...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/notes.html', className='ij.plugin.BrowserLauncher' items[114] = menu='File > Open Samples > Fluorescent Cells (400K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='FluorescentCells.zip', className='ij.plugin.URLOpener' items[115] = menu='File > Save As > BMP...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='bmp', className='ij.plugin.filter.Writer' items[116] = menu='File > Open Samples > Leaf (36K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='leaf.jpg', className='ij.plugin.URLOpener' items[117] = menu='File > Save As > Selection...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.RoiWriter' items[118] = menu='Edit > Selection > Straighten...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Straightener' items[119] = menu='File > Open Samples > Line Graph (21K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='LineGraph.jpg', className='ij.plugin.URLOpener' items[120] = menu='File > Open Samples > Neuron (1.6M, 5 channels)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Rat_Hippocampal_Neuron.zip', className='ij.plugin.URLOpener' items[121] = menu='Analyze > Tools > Scale Bar...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ScaleBar' items[122] = menu='Image > Overlay > List Elements', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='list', className='ij.plugin.OverlayCommands' items[123] = menu='Plugins > Install... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.PluginInstaller' items[124] = menu='Plugins > Macros > Run...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Macro_Runner' items[125] = menu='Plugins > Utilities > Reset...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='reset', className='ij.plugin.SimpleCommands' items[126] = menu='Process > FFT > FFT Options...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='options', className='ij.plugin.FFT' items[127] = menu='Edit > Undo', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='undo', className='ij.plugin.Commands' items[128] = menu='Help > Macro Functions...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/developer/macro/functions.html', className='ij.plugin.BrowserLauncher' items[129] = menu='Process > Filters > Gaussian Blur 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.GaussianBlur3D' items[130] = menu='Image > Stacks > Tools > Reduce...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackReducer' items[131] = menu='Analyze > Clear Results', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='clear', className='ij.plugin.filter.Analyzer' items[132] = menu='Window > Show All', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='show', className='ij.plugin.WindowOrganizer' items[133] = menu='File > Save As > Tiff...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='tiff', className='ij.plugin.filter.Writer' items[134] = menu='Process > Batch > Convert...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.BatchConverter' items[135] = menu='Process > Batch > Measure...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.BatchMeasure' items[136] = menu='File > Save As > Results...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.MeasurementsWriter' items[137] = menu='Analyze > Plot Profile', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='plot', className='ij.plugin.filter.Profiler' items[138] = menu='Image > Adjust > Line Width... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.LineWidthAdjuster' items[139] = menu='Plugins > New > Text Window...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='text+dialog', className='ij.plugin.NewPlugin' items[140] = menu='Analyze > Tools > Save XY Coordinates...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.XYCoordinates' items[141] = menu='Process > Noise > Remove Outliers...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='outliers', className='ij.plugin.filter.RankFilters' items[142] = menu='Process > FFT > Custom Filter...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.FFTCustomFilter' items[143] = menu='File > Save As > Jpeg...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='jpeg', className='ij.plugin.filter.Writer' items[144] = menu='Process > Filters > Maximum 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='max', className='ij.plugin.Filters3D' items[145] = menu='Process > Binary > Watershed', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='watershed', className='ij.plugin.filter.EDM' items[146] = menu='Help > Refresh Menus', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='menus', className='ij.plugin.ImageJ_Updater' items[147] = menu='Help > Dev. Resources...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='http://imagej.nih.gov/ij/developer/index.html', className='ij.plugin.BrowserLauncher' items[148] = menu='Image > Stacks > Tools > Make Substack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.SubstackMaker' items[149] = menu='File > Page Setup...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='setup', className='ij.plugin.filter.Printer' items[150] = menu='Analyze > Tools > Curve Fitting...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.Fitter' items[151] = menu='Plugins > Shortcuts > Remove...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='remove', className='ij.plugin.Hotkeys' items[152] = menu='File > Save As > AVI... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.AVI_Writer' items[153] = menu='File > Save As > Image Sequence... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackWriter' items[154] = menu='Process > Binary > Ultimate Points', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='points', className='ij.plugin.filter.EDM' items[155] = menu='File > Open Samples > Clown (14K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='clown.jpg', className='ij.plugin.URLOpener' items[156] = menu='File > Save As > ZIP...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='zip', className='ij.plugin.filter.Writer' items[157] = menu='Plugins > New > Plugin Frame', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='frame', className='ij.plugin.NewPlugin' items[158] = menu='Plugins > New > Plugin', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='plugin', className='ij.plugin.NewPlugin' items[159] = menu='Process > Filters > Mean...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='mean', className='ij.plugin.filter.RankFilters' items[160] = menu='Window > Put Behind [tab]', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='tab', className='ij.plugin.Commands' items[161] = menu='Edit > Selection > Make Band...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='band', className='ij.plugin.Selection' items[162] = menu='File > Open Samples > Gel (105K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='gel.gif', className='ij.plugin.URLOpener' items[163] = menu='File > Import > Text Image... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.TextReader' items[164] = menu='Process > Binary > Outline', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='outline', className='ij.plugin.filter.Binary' items[165] = menu='Process > Subtract Background...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.BackgroundSubtracter' items[166] = menu='File > Open Samples > Confocal Series (2.2MB)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='confocal-series.zip', className='ij.plugin.URLOpener' items[167] = menu='Analyze > Measure', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.Analyzer' items[168] = menu='File > Open Samples > Lena (68K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='lena-std.tif', className='ij.plugin.URLOpener' items[169] = menu='Analyze > Summarize', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='sum', className='ij.plugin.filter.Analyzer' items[170] = menu='Process > Enhance Contrast...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ContrastEnhancer' items[171] = menu='Plugins > New > JavaScript', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='javascript', className='ij.plugin.NewPlugin' items[172] = menu='Image > Transform > Results to Image', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='rtoi', className='ij.plugin.SimpleCommands' items[173] = menu='Analyze > Set Measurements...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='set', className='ij.plugin.filter.Analyzer' items[174] = menu='File > Open Samples > Mitosis (26MB, 5D stack)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Spindly-GFP.zip', className='ij.plugin.URLOpener' items[175] = menu='Plugins > Compile and Run...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Compiler' items[176] = menu='Process > FFT > Redisplay Power Spectrum', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='redisplay', className='ij.plugin.FFT' items[177] = menu='Analyze > Surface Plot...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.SurfacePlotter' items[178] = menu='Process > Filters > Show Circular Masks...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='masks', className='ij.plugin.filter.RankFilters' items[179] = menu='Process > Filters > Maximum...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='max', className='ij.plugin.filter.RankFilters' items[180] = menu='File > Save As > PGM...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='pgm', className='ij.plugin.filter.Writer' items[181] = menu='Process > FFT > Swap Quadrants', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='swap', className='ij.plugin.FFT' items[182] = menu='Process > Noise > Remove NaNs...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='nan', className='ij.plugin.filter.RankFilters' items[183] = menu='File > Open Samples > Dot Blot (7K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Dot_Blot.jpg', className='ij.plugin.URLOpener' items[184] = menu='Process > Find Maxima...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.MaximumFinder' items[185] = menu='File > Open Samples > Blobs (25K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='blobs.gif', className='ij.plugin.URLOpener' items[186] = menu='File > Open Samples > Boats (356K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='boats.gif', className='ij.plugin.URLOpener' items[187] = menu='File > Import > LUT... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.LutLoader' items[188] = menu='Plugins > Utilities > Search...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='search', className='ij.plugin.SimpleCommands' items[189] = menu='Edit > Selection > Properties... ', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='properties', className='ij.plugin.Selection' items[190] = menu='File > Open Samples > T1 Head Renderings (736K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='t1-rendering.zip', className='ij.plugin.URLOpener' items[191] = menu='File > New > Hyperstack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.HyperStackMaker' items[192] = menu='Process > Binary > Skeletonize', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='skel', className='ij.plugin.filter.Binary' items[193] = menu='Process > Binary > Options...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='options', className='ij.plugin.filter.Binary' items[194] = menu='File > Import > TIFF Virtual Stack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.FileInfoVirtualStack' items[195] = menu='Plugins > New > Table...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='table', className='ij.plugin.NewPlugin' items[196] = menu='Image > Stacks > Tools > Grouped Z Project...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.GroupedZProjector' items[197] = menu='File > Open Samples > Organ of Corti (2.8M, 4D stack)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='organ-of-corti.zip', className='ij.plugin.URLOpener' items[198] = menu='File > New > Internal Clipboard', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='show', className='ij.plugin.Clipboard' items[199] = menu='Edit > Selection > Area to Line', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='toline', className='ij.plugin.Selection' items[200] = menu='Analyze > Gels > Plot Lanes', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='plot', className='ij.plugin.GelAnalyzer' items[201] = menu='Image > Rename...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='rename', className='ij.plugin.SimpleCommands' items[202] = menu='Process > Filters > Minimum 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='min', className='ij.plugin.Filters3D' items[203] = menu='Edit > Selection > To Bounding Box', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='tobox', className='ij.plugin.Selection' items[204] = menu='Process > Filters > Mean 3D...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='mean', className='ij.plugin.Filters3D' items[205] = menu='Edit > Selection > Rotate...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='rotate', className='ij.plugin.Selection' items[206] = menu='Edit > Selection > Scale... ', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.RoiScaler' items[207] = menu='Plugins > New > Plugin Filter', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='filter', className='ij.plugin.NewPlugin' items[208] = menu='Image > Transform > Image to Results', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='itor', className='ij.plugin.SimpleCommands' items[209] = menu='File > Save As > FITS...', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='fits', className='ij.plugin.filter.Writer' items[210] = menu='File > Import > Results... ', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='import', className='ij.plugin.SimpleCommands' items[211] = menu='File > Open Samples > Cardio (768K, RGB DICOM)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='cardio.dcm.zip', className='ij.plugin.URLOpener' items[212] = menu='Image > Stacks > Tools > Montage to Stack...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.StackMaker' items[213] = menu='File > Import > AVI...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.AVI_Reader' items[214] = menu='Image > Stacks > 3D Project...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Projector' items[215] = menu='Process > Binary > Voronoi', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='voronoi', className='ij.plugin.filter.EDM' items[216] = menu='Analyze > Distribution...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.Distribution' items[217] = menu='Edit > Selection > Interpolate', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='interpolate', className='ij.plugin.Selection' items[218] = menu='Process > Binary > Distance Map', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='edm', className='ij.plugin.filter.EDM' items[219] = menu='File > Open Samples > Tree Rings (48K)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='Tree_Rings.jpg', className='ij.plugin.URLOpener' items[220] = menu='Image > Stacks > Make Montage...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.MontageMaker' items[221] = menu='Edit > Copy', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='copy', className='ij.plugin.Clipboard' items[222] = menu='Image > Adjust > Color Threshold...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.ColorThresholder' items[223] = menu='Edit > Draw', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='draw', className='ij.plugin.filter.Filler' items[224] = menu='Process > Filters > Unsharp Mask...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.UnsharpMask' items[225] = menu='Image > Type > 8-bit Color', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='8-bit Color', className='ij.plugin.Converter' items[226] = menu='Window > Cascade', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='cascade', className='ij.plugin.WindowOrganizer' items[227] = menu='Process > FFT > Inverse FFT', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='inverse', className='ij.plugin.FFT' items[228] = menu='Plugins > Utilities > Monitor Events...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.EventListener' items[229] = menu='Analyze > Gels > Label Peaks', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='label', className='ij.plugin.GelAnalyzer' items[230] = menu='Plugins > Utilities > Threads...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.ThreadLister' items[231] = menu='Analyze > Gels > Select First Lane', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='first', className='ij.plugin.GelAnalyzer' items[232] = menu='Edit > Clear', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='clear', className='ij.plugin.filter.Filler' items[233] = menu='Plugins > Utilities > Monitor Memory...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.frame.MemoryMonitor' items[234] = menu='Image > Stacks > Plot Z-axis Profile', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.ZAxisProfiler' items[235] = menu='Image > Stacks > Tools > Remove Slice Labels', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='remove', className='ij.plugin.SimpleCommands' items[236] = menu='Analyze > Tools > Fractal Box Count...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.filter.FractalBoxCounter' items[237] = menu='Image > Color > Edit LUT...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.LUT_Editor' items[238] = menu='Edit > Selection > Create Selection', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='from', className='ij.plugin.Selection' items[239] = menu='File > Open Samples > CT (420K, 16-bit DICOM)', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='ct.dcm.zip', className='ij.plugin.URLOpener' items[240] = menu='Image > Stacks > Stack to Images', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='toimages', className='ij.plugin.StackEditor' items[241] = menu='Plugins > Utilities > ImageJ Properties...', priority=0.0, enabled=true, pluginType=LegacyCommand, className='ij.plugin.JavaProperties' items[242] = menu='Edit > Paste', priority=0.0, enabled=true, pluginType=LegacyCommand, arg='paste', className='ij.plugin.Clipboard',null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Analyze Histogram Plot Measure Analyze Particles... Summarize Distribution... Label Clear Results Set Measurements... Set Scale... Calibrate... Histogram Plot Profile Surface Plot... Gels Select First Lane Select Next Lane Plot Lanes Re-plot Lanes Reset Label Peaks Gel Analyzer Options... Tools Save XY Coordinates... Fractal Box Count... Analyze Line Graph Curve Fitting... Scale Bar... Calibration Bar... Synchronize Windows items[1] = Window Show All Put Behind [tab] Cascade Tile Tile Vertical items[2] = Edit Undo Cut Copy Copy To System Paste Paste Control... Clear Clear Outside Fill Draw Invert... Selection Select View Select Overlays Deselect Overlays Restore Selection Fit Spline Fit Circle Fit Ellipse Interpolate Convex Hull Make Inverse Create Selection Create Mask Properties... Scale... Rotate... Enlarge... Make Band... Straighten... To Bounding Box Line to Area Area to Line Image to Selection... Specify... Options Line Width... Input/Output... Fonts... Profile Plot Options... Rounded Rect Tool... Arrow Tool... Point Tool... Wand Tool... Channels... Appearance... Conversions... Memory & Threads... Proxy Settings... Compiler... DICOM... Compatibility... Misc... Reset Look and Feel... items[3] = Image Type 8-bit Color RGB Color RGB Stack HSB Stack Change... Adjust Auto-Contrast Brightness/Contrast... Window/Level... Color Balance... Color Threshold... Size... Canvas Size... Line Width... Delete Threshold Resize... Threshold... Properties... Color Channels Tool... Split Channels Merge Channels... Arrange Channels... Show LUT Show LUT As Table Stack to RGB Display LUTs Edit LUT... Spectral Composite... Stacks Orthogonal Views Images to Stack Stack to Images Make Montage... Reslice [/]... Z Project... 3D Project... Plot Z-axis Profile Label... Statistics Tools Combine... Concatenate... Reduce... Insert... Montage to Stack... Make Substack... Grouped Z Project... Set Label... Remove Slice Labels Reslice... Hyperstacks New Hyperstack... Reduce Dimensionality... Rename... Scale... Transform Flip Horizontally Flip Vertically Flip Axis Rotate 90 Degrees Right Rotate 90 Degrees Left Rotate... Image to Results Results to Image Bin... Rotate... Translate... Overlay From Overlay Manager Remove Overlay References Remove Overlay Flatten Properties... Labels... Add Image List Elements Overlay Manager Overlay Options... Lookup Tables Invert LUT Select... Apply LUT 3-3-2 RGB Blue Cyan Fire Grays Green Ice Magenta Red Red-Green Spectrum Yellow NCSA PalEdit 16_colors 5_ramps 6_shades blue_orange_icb brgbcmyw cool edges gem phase royal sepia smart thal thallium unionjack WCIF Cyan Hot Green Fire Blue HiLo ICA ICA2 ICA3 Magenta Hot Orange Hot Rainbow RGB Red Hot Yellow Hot Animation Start Animation Stop Animation Stop All Animations Animation Options... Axes Add Axis... Axis Position Backward Axis Position Forward Delete Axis... Edit Axes... Reorder Axis Set Active Axis... Set Axis Position... Crop Data Add Data... Delete Data... Reorder Data... Duplicate Show Info... Zoom In Out Original Scale View 100% To Selection Set... items[4] = Help ImageJ News... Documentation... Installation... Mailing List... Dev. Resources... Plugins... Macros... Macro Functions... Refresh Menus About Plugins About This Submenu... ImageJ Website... Switch to Legacy Mode Update... Upload Sample Image items[5] = Process Smooth Sharpen Find Edges Find Maxima... Enhance Contrast... Noise Add Noise... Add Specified Noise... Salt and Pepper Despeckle Remove Outliers... Remove NaNs... Noise Reduction Adaptive Median Alpha Trimmed Mean Contraharmonic Mean Geometric Mean Harmonic Mean Maximum Mean Median Midpoint Minimum Trimmed Mean Binary Outline Fill Holes Skeletonize Distance Map Ultimate Points Watershed Voronoi Options... Binarize... Close Create Mask... Dilate Erode Make Binary... Make Mask Overlay... Open FFT FFT Inverse FFT Redisplay Power Spectrum FFT Options... Bandpass Filter... Custom Filter... FD Math... Swap Quadrants Filters Convolve... Median... Mean... Minimum... Maximum... Unsharp Mask... Variance... Gaussian Blur 3D... Median 3D... Mean 3D... Minimum 3D... Maximum 3D... Variance 3D... Show Circular Masks... Gaussian Blur... Batch Measure... Convert... Macro... Virtual Stack... Image Calculator... Subtract Background... Math Add... Subtract... Multiply... Divide... Power... AND... OR... XOR... Min... Max... Gamma... Set... Log... Exp... Square... Square Root... Reciprocal... NaN Background Abs... Equation... Shadows North Northeast East Southeast South Southwest West Northwest Shadows Demo items[6] = File New Image... Hyperstack... Text Window Internal Clipboard System Clipboard Script... Open... Open Next Open Samples AuPbSn 40 (56K) Bat Cochlea Volume (19K) Bat Cochlea Renderings (449K) Blobs (25K) Boats (356K) Bridge (174K) Cardio (768K, RGB DICOM) Cell Colony (31K) Clown (14K) Confocal Series (2.2MB) CT (420K, 16-bit DICOM) Dot Blot (7K) Embryos (42K) Fluorescent Cells (400K) Fly Brain (1MB) Gel (105K) HeLa Cells (1.3M, 48-bit RGB) Leaf (36K) Lena (68K) Line Graph (21K) Mitosis (26MB, 5D stack) MRI Stack (528K) M51 Galaxy (177K, 16-bits) Neuron (1.6M, 5 channels) Nile Bend (1.9M) Organ of Corti (2.8M, 4D stack) Particles (75K) T1 Head (2.4M, 16-bits) T1 Head Renderings (736K) TEM Filter (112K) Tree Rings (48K) Cache Sample Images Open Recent ...4byteCompressedImageReaderBugFile.tif ...6&sizeC=3&sizeT=10&sizeZ=5&rgb=3.fake ...6&sizeC=3&sizeZ=5&sizeT=10&rgb=3.fake ...=2048&sizeT=2000&pixelType=int16.fake ...=2048&sizeY=2048&pixelType=int16.fake ...age-goodbrains-warp40-5_e1e-2.am.nrrd ...gb=3&sizeC=3&sizeX=512&sizeY=512.fake ...n_0000000418_2010-10-27 13_31_31Z.scn ...nt16&sizeC=3&sizeX=512&sizeY=512.fake ...nt16&sizeX=512&sizeY=512&sizeC=3.fake ...pe=int16&rgb=3&interleaved=false.fake ...sizeX=256&sizeY=256&sizeZ=100000.fake ...ugePlane&sizeX=70000&sizeY=80000.fake ...ype=int16&rgb=3&interleaved=true.fake /Us...dschoTest&sizeX=512&sizeY=512.fake /Use...MFGTMP_081128200001_A02f239d1.C01 /User...MFGTMP_081222130005_E07f00d0.C01 /Users...multi-channel-4D-series.ome.tif /Users/mhi...Antarctic_Diatom_D3D_01.ome /Users/mhiner...Hoechst_ND - n000001.tif /Users/mhiner...strike-uncompressed.tiff /Users/mhiner/...mri-stack-animation.mov /Users/mhiner/Downloads/walbytest.png /Users/mhiner/argh.java /Users/mhiner/blergh.png /Users/mhiner/d...EL_ImageToProcess2.png /Users/mhiner/d...bat-cochlea-volume.zip /Users/mhiner/da...CR-MONO1-10-chest.dcm /Users/mhiner/dat...a_fixall_buta1a2.txt /Users/mhiner/data...Level001-ES-083.avi /Users/mhiner/data...tubhiswt_C1.ome.tif /Users/mhiner/data/...organ-of-corti.tif /Users/mhiner/data/...tiffany.color.tiff /Users/mhiner/data/...tubhiswt4D.ome.tif /Users/mhiner/data/0.ome.tiff /Users/mhiner/data/Cats.png /Users/mhiner/data/FIX ...lastchance.tif /Users/mhiner/data/FIX the...scifio4.tif /Users/mhiner/data/FIX thes...dice_1.gif /Users/mhiner/data/FIX thes...scifio.tif /Users/mhiner/data/Level001-ES-083.avi /Users/mhiner/data/Slugthing.jpg /Users/mhiner/data/blergh.java /Users/mhiner/data/burgh.png /Users/mhiner/data/farbtest.png /Users/mhiner/data/im...DMSOHigh_001.jpg /Users/mhiner/data/im...kidney_TFl_1.bmp /Users/mhiner/data/ima...img_0_Cy5_1.tif /Users/mhiner/data/ima...pnggrad8rgb.png /Users/mhiner/data/imag...australia1.mng /Users/mhiner/data/imag...mri-stack0.pcx /Users/mhiner/data/image...vogtstar.fits /Users/mhiner/data/imagej...FLAG_B24.PCT /Users/mhiner/data/imagejt...pigfoot.pgm /Users/mhiner/data/imagejt...rgbtest.png /Users/mhiner/data/imagejt...testrgb.png /Users/mhiner/data/imagejte...blergh.png /Users/mhiner/data/imagejte...dice_1.gif /Users/mhiner/data/imagejte...image1.eps /Users/mhiner/data/imagejtests/2kx2k.jpf /Users/mhiner/data/imagejtests/Cats.png /Users/mhiner/data/imagejtests/brain.dcm /Users/mhiner/data/imagejtests/qdna1.ics /Users/mhiner/data/imagejtests/qdna1.ids /Users/mhiner/data/imagejtests/test1.png /Users/mhiner/data/imagejtests/test2.png /Users/mhiner/data/imagejtests/test3.png /Users/mhiner/data/pnggrad8rgb.png /Users/mhiner/data/qdna1.ics /Users/mhiner/data/t...4D-series.ome.tif /Users/mhiner/data/te...epsImgColony.tif /Users/mhiner/data/te...z-series.ome.tif /Users/mhiner/data/test...Alx-488-pk.tif /Users/mhiner/data/test11_R3D.dv /Users/mhiner/data/test_...abdominal.dcm /Users/mhiner/data/test_ima...image3.eps /Users/mhiner/data/test_imag...ankle.dcm /Users/mhiner/data/test_imag...brain.dcm /Users/mhiner/data/test_imag...worm.tiff /Users/mhiner/data/writertests/test.avi /Users/mhiner/data/writertests/test.eps /Users/mhiner/data/writertests/test.ics /Users/mhiner/data/writertests/test.java /Users/mhiner/data/writertests/test.jpeg /Users/mhiner/data/writertests/test.mov /Users/mhiner/data/writertests/test.png /Users/mhiner/data/writertests/test2.eps /Users/mhiner/test.jpf /Users/mhiner/test.png /Users/mhiner/test.tif /Users/mhiner/test.tiff /Users/mhiner/test2.tif /Users/mhiner/test3.jp2 /Users/mhiner/test3.tif /Users/mhiner/test4.jp2 /Users/mhiner/test4.jpf /Users/mhiner/test5.jp2 /Users/mhiner/testrgb.png Clear List Import Image Sequence... Raw... LUT... Text Image... Text File... Results... Table... URL... Stack From List... TIFF Virtual Stack... AVI... XY Coordinates... Close Close All Save As Tiff... Gif... Jpeg... Text Image... ZIP... Raw Data... Image Sequence... AVI... BMP... PNG... PGM... FITS... LUT... Selection... XY Coordinates... Results... Text... Revert Save Save As... Page Setup... Print... items[7] = Plugins Macros Install... Run... Edit... Startup Macros... Record... Shortcuts List Shortcuts... Create Shortcut... Install Plugin... Remove... Utilities Control Panel... Search... Monitor Events... Monitor Memory... Capture Screen Capture Image ImageJ Properties... Threads... Reset... Benchmark Find Commands... New Macro Macro Tool JavaScript Plugin Plugin Filter Plugin Frame Plugin Tool Text Window... Table... Compile and Run... Install... Debug Inspect Image Inspect Objects Invalid Command Subscribers System Information Watch Events Sandbox Button Demo Dialog Prompt Demo Mandelbrot Set Measurement Demo Mixed World Command Multidimensional Test Image Parameter Assignment Order PointSet Demo Statistics Demo Table Demo TextDisplayTest Script Run Script,null,null), called from non-EDT Thread:null [INFO] Created service: imagej.legacy.DefaultLegacyService [DEBUG] [imagej.legacy.DefaultLegacyService created in 683 ms] [DEBUG] Creating service: imagej.ui.common.awt.AWTScreenCaptureService [INFO] Created service: imagej.ui.common.awt.AWTScreenCaptureService [DEBUG] [imagej.ui.common.awt.AWTScreenCaptureService created in 1 ms] [DEBUG] Creating service: imagej.ui.swing.overlay.JHotDrawService [INFO] Created service: imagej.ui.swing.overlay.JHotDrawService [DEBUG] [imagej.ui.swing.overlay.JHotDrawService created in 1 ms] [DEBUG] Creating service: imagej.ui.swing.SwingIconService [INFO] Created service: imagej.ui.swing.SwingIconService [DEBUG] [imagej.ui.swing.SwingIconService created in 2 ms] [DEBUG] Creating service: io.scif.services.DefaultInitializeService [INFO] Created service: io.scif.services.DefaultInitializeService [DEBUG] [io.scif.services.DefaultInitializeService created in 1 ms] [DEBUG] Creating service: imagej.render.DummyRenderingService [INFO] Created service: imagej.render.DummyRenderingService [DEBUG] [imagej.render.DummyRenderingService created in 1 ms] [DEBUG] Creating service: imagej.data.display.DummyScreenCaptureService [INFO] Created service: imagej.data.display.DummyScreenCaptureService [DEBUG] [imagej.data.display.DummyScreenCaptureService created in 0 ms] [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false,null,null), called from non-EDT Thread:null [DEBUG] Received command line arguments: [INFO] Discovered user interface: imagej.ui.swing.sdi.SwingUI [INFO] Discovered user interface: imagej.ui.swing.mdi.SwingMdiUI [INFO] Launching user interface: imagej.ui.swing.sdi.SwingUI [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false menus = javax.swing.JMenuBar[,0,0,0x0,invalid,layout=javax.swing.plaf.basic.DefaultMenuLayout,alignmentX=0.0,alignmentY=0.0,border=com.apple.laf.AquaMenuBarBorder@aa3e5b,flags=8,maximumSize=,minimumSize=,preferredSize=,margin=,paintBorder=true],null,null), called from non-EDT Thread:null [INFO] Found 25 Tool plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Konami,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Rectangle,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Oval,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Polygon,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Line,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Angle,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Point,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Axis Position Shortcuts,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Context Menus,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Pan Activator,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Probe,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Window Focus,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Zoom Shortcuts,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Wand,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Text,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Zoom,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Pan,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Paintbrush,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Pencil,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Spray Can,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Flood Fill,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Arrow,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Foreground,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Background,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Keyboard Shortcuts,null,null), called from non-EDT Thread:null [DEBUG] publish( tool = imagej.tool.DummyTool@92997e,null,null), called from non-EDT Thread:null [DEBUG] publish( tool = Rectangle,null,null), called from non-EDT Thread:null [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-ui-swing-tools-2.0.0-SNAPSHOT.jar!/icons/tools/rectangle.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-ui-swing-tools-2.0.0-SNAPSHOT.jar!/icons/tools/oval.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-ui-swing-tools-2.0.0-SNAPSHOT.jar!/icons/tools/polygon.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-ui-swing-tools-2.0.0-SNAPSHOT.jar!/icons/tools/line.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-ui-swing-tools-2.0.0-SNAPSHOT.jar!/icons/tools/angle.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-ui-swing-tools-2.0.0-SNAPSHOT.jar!/icons/tools/point.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/wand.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-ui-swing-tools-2.0.0-SNAPSHOT.jar!/icons/tools/text.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/zoom.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/pan.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/paintbrush.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/pencil.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/spray-can.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/flood-fill.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/arrow.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/blank.png [DEBUG] Loading icon from jar:file:/Users/mhiner/Desktop/ImageJ.app/jars/ij-tools-2.0.0-SNAPSHOT.jar!/icons/tools/blankBlack.png [INFO] Found 3 PlaneConverter plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false display = null window = imagej.ui.swing.SwingApplicationFrame[frame0,320,446,468x70,layout=java.awt.BorderLayout,title=ImageJ,resizable,normal,defaultCloseOperation=DO_NOTHING_ON_CLOSE,rootPane=javax.swing.JRootPane[,0,22,468x48,layout=javax.swing.JRootPane$RootLayout,alignmentX=0.0,alignmentY=0.0,border=,flags=16777673,maximumSize=,minimumSize=,preferredSize=],rootPaneCheckingEnabled=true],null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false display = null window = imagej.ui.swing.SwingApplicationFrame[frame0,320,446,468x70,invalid,layout=java.awt.BorderLayout,title=ImageJ,resizable,normal,defaultCloseOperation=DO_NOTHING_ON_CLOSE,rootPane=javax.swing.JRootPane[,0,22,468x48,invalid,layout=javax.swing.JRootPane$RootLayout,alignmentX=0.0,alignmentY=0.0,border=,flags=16777673,maximumSize=,minimumSize=,preferredSize=],rootPaneCheckingEnabled=true],null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = ArrayDataAccess,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Default,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PlanarAccess,null,null), called from non-EDT Thread:null [INFO] Found 16 Codec plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [INFO] Found 3 ConsoleArgument plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [INFO] Found 4 IOPlugin plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [INFO] Found 19 OptionsPlugin plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsAppearance@10fba26,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsArrowTool@18651db,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.options.OptionsChannels@1681629,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsCompatibility@86f716,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsCompiler@c7da23,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsConversions@c24ae7,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsDicom@1c39aa6,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.data.options.OptionsOverlay@de0c45,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsFont@1f7a434,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsInputOutput@13d76d5,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsLineWidth@44c4a4,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.ui.swing.commands.OptionsLookAndFeel@ca2076,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsMemoryAndThreads@1961f4,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsMisc@6e119d,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsPointTool@469729,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsProfilePlot@6e1f8f,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsProxy@1d9e895,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsRoundedRectangleTool@134a2a3,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = imagej.core.options.OptionsWandTool@a1a602,null,null), called from non-EDT Thread:null [INFO] Found 2 TextFormat plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [INFO] Found 2 AutoscaleMethod plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Confidence Interval,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Default,null,null), called from non-EDT Thread:null [INFO] Found 13 CalculatorOp plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Add,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Subtract,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Multiply,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Divide,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = AND,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = OR,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = XOR,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Min,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Max,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Average,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Difference,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Copy,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Transparent-zero,null,null), called from non-EDT Thread:null [INFO] Found 17 ThresholdMethod plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Default,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Huang,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Intermodes,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = IsoData,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Li,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = MaxEntropy,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = MaxLikelihood,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Mean,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = MinError(I),null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Minimum,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Moments,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Otsu,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Percentile,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = RenyiEntropy,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Shanbhag,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Triangle,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = Yen,null,null), called from non-EDT Thread:null [INFO] Found 4 DragAndDropHandler plugins. [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false items[0] = PluginInfo,null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false display = null window = imagej.ui.swing.SwingApplicationFrame[frame0,320,446,468x70,invalid,layout=java.awt.BorderLayout,title=ImageJ,resizable,normal,defaultCloseOperation=DO_NOTHING_ON_CLOSE,rootPane=javax.swing.JRootPane[,0,22,468x48,invalid,layout=javax.swing.JRootPane$RootLayout,alignmentX=0.0,alignmentY=0.0,border=,flags=16777673,maximumSize=,minimumSize=,preferredSize=],rootPaneCheckingEnabled=true],null,null), called from non-EDT Thread:null [DEBUG] publish( context = org.scijava.Context@bc5596 consumed = false focus = false,null,null), called from non-EDT Thread:null java -Djava.ext.dirs=/Library/Java/Extensions:/System/Library/Java/Extensions:/System/Library/Frameworks/JavaVM.framework/Home/lib/ext -Dpython.cachedir.skip=true -Dplugins.dir=/Users/mhiner/Desktop/ImageJ.app -Xmx930m -Xincgc -XX:PermSize=128m -Djava.class.path=/Users/mhiner/Desktop/ImageJ.app/jars/ij-launcher-2.0.2.jar -Dimagej.dir=/Users/mhiner/Desktop/ImageJ.app -Dij.dir=/Users/mhiner/Desktop/ImageJ.app -Dfiji.dir=/Users/mhiner/Desktop/ImageJ.app -Dfiji.executable=./Contents/MacOS/debug -Dij.executable=./Contents/MacOS/debug -Djava.library.path=/Users/mhiner/Desktop/ImageJ.app/lib/macosx:/Users/mhiner/Desktop/ImageJ.app/mm/macosx -Dij.debug=true -Dscijava.log.level=debug imagej.ClassLauncher -ijjarpath jars -ijjarpath plugins imagej.Main