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Ticket #1301 (closed defect: moved)

Opened 2012-07-09T15:08:38-05:00

Last modified 2012-10-10T15:33:19-05:00

Support slice labels

Reported by: bdezonia Owned by: bdezonia
Priority: major Milestone: imagej2-b10-compatibility
Component: Data Model Version:
Severity: serious Keywords:
Cc: Blocked By:
Blocking: #1342


In IJ1 an ImageStack can get tagged with slice labels (programmatically by plugins or importers). These labels are displayed in the image window label and Image > Stacks > Tools > Remove Slice Labels clears them out.

IJ2 does not handle slice labels at all. Nothing is displayed in the image window label and remove slice labels is unnecessary.

We need to tag each plane with metadata on the IJ2 side and harmonize that info across the legacy layer. Note that restructuring plugins (add/del axis, add/del data, reorder data, etc.) need to maintain this metadata.

Change History

comment:1 Changed 2012-07-11T11:11:36-05:00 by bdezonia

Testing note: running FFT after setting Complex Fourier Transform option to true results in an image with two slice labels (Real and Imaginary). Once slice labels are in place test this command to see if they are working.

Last edited 2012-07-11T11:11:58-05:00 by bdezonia

comment:2 Changed 2012-07-11T13:10:22-05:00 by bdezonia

Testing note 2: Process > FIlters > Show Circular Masks also generates an image with slice labels.

comment:3 Changed 2012-07-17T14:57:34-05:00 by bdezonia

  • Blocking 1342 added

comment:4 Changed 2012-09-06T16:54:11-05:00 by bdezonia

  • Milestone changed from imagej-2.0.0-beta4 to imagej-2.0.0-beta5

comment:5 Changed 2012-10-10T15:33:19-05:00 by curtis

  • Milestone changed from imagej-2.0.0-beta6 to imagej-2.0.0-beta9

comment:6 Changed 2014-06-15T21:54:05-05:00 by curtis

  • Status changed from new to closed
  • Resolution set to moved