[ImageJ-builds] Build failed in Jenkins: Synchronize-and-deploy-IJ1 #5088

jenkins at imagej.net jenkins at imagej.net
Tue Feb 18 22:42:42 CST 2014 

See <http://jenkins.imagej.net/job/Synchronize-and-deploy-IJ1/5088/>

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[...truncated 594 lines...]
      □ Improved text tool recording.
      □ NonBlockingGenericDialogs are added to the Window menu.
      □ Thanks to Michael Schmid, the Edit>Crop command is undoable.
      □ Thanks to Aryeh Weiss, added the RoiEncoder.save() and
        RoiDecoder.open() methods (example
    ).
+ git commit-tree 665f05893863bc8253c85a8b8d4be0c38890609e -p a4b99f0c875fdfdbe081abf75dbabf7c08e14689
+ commit=bb69b4baf61cf04d7f5b7ea08a8bc879630c772f
+ git update-ref refs/heads/imagej bb69b4baf61cf04d7f5b7ea08a8bc879630c772f
+ cd ../..
+ rm -rf tmpCommit tmpIndex
+ dirname tools/jenkins-job.sh
+ sh -x tools/sync-with-imagej.sh
+ URL=git://github.com/imagej/ImageJA
+ BRANCH=refs/heads/master
+ IJ1BRANCH=refs/heads/imagej
+ test a--wayne = a
+ NEED_TO_UPDATE_WORKING_TREE=
+ git config --bool core.bare
+ test false = true
+ git symbolic-ref HEAD
+ test refs/heads/master != 
+ git fetch git://github.com/imagej/ImageJA refs/heads/master
+ ERROR=From git://github.com/imagej/ImageJA
 * branch            master     -> FETCH_HEAD
+ git rev-parse refs/heads/master
+ HEAD=6d1a24a4eb63391b0b40b4ad1209de80b3b8e5e6
+ test -z 
+ git push . FETCH_HEAD:refs/heads/master
To .
   6d1a24a..f3197a2  FETCH_HEAD -> master
+ git rev-parse refs/heads/master
+ HEAD=f3197a25acc1334d487e4a1f05028bb210d80d2d
+ git rev-parse refs/heads/imagej
+ IJ1HEAD=bb69b4baf61cf04d7f5b7ea08a8bc879630c772f
+ git merge-base bb69b4baf61cf04d7f5b7ea08a8bc879630c772f f3197a25acc1334d487e4a1f05028bb210d80d2d
+ test bb69b4baf61cf04d7f5b7ea08a8bc879630c772f != a4b99f0c875fdfdbe081abf75dbabf7c08e14689
+ git log -1 --pretty=format:%s bb69b4baf61cf04d7f5b7ea08a8bc879630c772f
+ sed -n s/^[^0-9]*\([^ 0-9A-Za-z] \)\?\([1-9][\.0-9]*.\)[^0-9A-Za-z].*$/\2/p
+ VERSION=1.48r
+ git rev-parse --git-dir
+ export GIT_INDEX_FILE=.git/IJ1INDEX
+ git read-tree bb69b4baf61cf04d7f5b7ea08a8bc879630c772f
+ MAVEN_URL=http://maven.imagej.net/content/repositories/releases
+ POM_SCIJAVA_URL=http://maven.imagej.net/content/repositories/releases/org/scijava/pom-scijava
+ curl -s http://maven.imagej.net/content/repositories/releases/org/scijava/pom-scijava/maven-metadata.xml
+ sed -n s/.*<release>\(.*\)<\/release>.*/\1/p
+ POM_SCIJAVA_VERSION=1.126
+ git show f3197a25acc1334d487e4a1f05028bb210d80d2d:pom.xml
+ sed -e /^\t</s/\(<version>\).*\(<\/version>\)/\11.48r\2/ -e /<parent>/,/<\/pa/s/\(<version>\)[^<]*/\11.126/
+ git hash-object -w .git/IJ1INDEX.pom.new
+ POMHASH=9bbd23ebdcc34c9c922a6fb9b617b9b49c560e71
+ printf 100644 9bbd23ebdcc34c9c922a6fb9b617b9b49c560e71 0\tpom.xml\n
+ git rev-parse f3197a25acc1334d487e4a1f05028bb210d80d2d:.gitignore
+ GITIGNORE=beef00d016539f0af7e0cb61be0ef1028cc8db48
+ printf 100644 beef00d016539f0af7e0cb61be0ef1028cc8db48 0\t.gitignore\n
+ git ls-files --stage
+ mv .git/IJ1INDEX .git/IJ1INDEX.old
+ sed -e s~\t\(.*\.java\)$~\tsrc/main/java/\1~ -e s~\tplugins/\(.*\)\.source$~\tsrc/main/java/\1.java~ -e s~\t\(IJ_Props.txt\|macros/\)~\tsrc/main/resources/\1~ -e s~\timages/~\tsrc/main/resources/~ -e s~\t\(MANIFEST.MF\)$~\tsrc/main/resources/META-INF/\1~ -e /\t\(plugins\/.*\.class\|.FBCIndex\|ij\/plugin\/RandomOvals.txt\)$/d
+ git update-index --index-info
+ echo Synchronize with ImageJ 1.48r
+ git write-tree
+ TREE=a6b88df62cd62f86d3b5078126e7f59bf8beb342
+ git commit-tree a6b88df62cd62f86d3b5078126e7f59bf8beb342 -p f3197a25acc1334d487e4a1f05028bb210d80d2d -p bb69b4baf61cf04d7f5b7ea08a8bc879630c772f
+ NEWHEAD=fdac50b82b18f9287acd32a8cb79422c90efe944
+ git update-ref -m Synchronize with ImageJ1 refs/heads/master fdac50b82b18f9287acd32a8cb79422c90efe944 f3197a25acc1334d487e4a1f05028bb210d80d2d
+ git tag -a -m v1.48r v1.48r fdac50b82b18f9287acd32a8cb79422c90efe944
+ test -z 
+ test -n 
+ git push git at dev.imagejdev.org:imageja.git imagej master v1.48r
+ cd tools
+ git push git at dev.imagejdev.org:imageja.git tools
+ ERR=To git at dev.imagejdev.org:imageja.git
   a4b99f0..bb69b4b  imagej -> imagej
   f3197a2..fdac50b  master -> master
 * [new tag]         v1.48r -> v1.48r
Everything up-to-date
+ git push git at github.com:imagej/ImageJA imagej master v1.48r
+ cd tools
+ git push git at github.com:imagej/ImageJA tools
+ ERR=To git at github.com:imagej/ImageJA
   a4b99f0..bb69b4b  imagej -> imagej
   f3197a2..fdac50b  master -> master
 * [new tag]         v1.48r -> v1.48r
Everything up-to-date
+ git push hudson-imagej at repo.or.cz:/srv/git/imageja.git imagej master v1.48r
+ cd tools
+ git push hudson-imagej at repo.or.cz:/srv/git/imageja.git tools
+ ERR=To hudson-imagej at repo.or.cz:/srv/git/imageja.git
   a4b99f0..bb69b4b  imagej -> imagej
   f3197a2..fdac50b  master -> master
 * [new tag]         v1.48r -> v1.48r
Everything up-to-date
+ NEXUS_URL=http://maven.imagej.net/
+ SONATYPE_PROXY=http://maven.imagej.net//service/local/data_cache/repositories/sonatype/content
+ git stash
No local changes to save
+ git checkout master
Previous HEAD position was f3197a2... Bump parent POM version, for OSS Sonatype goodness
Switched to branch 'master'
Your branch is ahead of 'origin/master' by 2 commits.
+ git stash
No local changes to save
+ mvn clean
[INFO] Scanning for projects...
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for net.imagej:ij:jar:1.48r
[WARNING] 'reporting.plugins.plugin.version' for org.apache.maven.plugins:maven-javadoc-plugin is missing. @ org.scijava:pom-scijava:1.126, /var/lib/jenkins/.m2/repository/org/scijava/pom-scijava/1.126/pom-scijava-1.126.pom, line 469, column 12
[WARNING] 
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING] 
[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.
[WARNING] 
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building ImageJ 1.48r
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ ij ---
[INFO] Deleting /data/devel/jenkins/jobs/Synchronize-and-deploy-IJ1/workspace/target
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 0.953s
[INFO] Finished at: Tue Feb 18 22:42:37 CST 2014
[INFO] Final Memory: 5M/360M
[INFO] ------------------------------------------------------------------------
+ mvn -DupdateReleaseInfo=true -Psonatype-oss-release deploy nexus-staging:release
[INFO] Scanning for projects...
[WARNING] 
[WARNING] Some problems were encountered while building the effective model for net.imagej:ij:jar:1.48r
[WARNING] 'reporting.plugins.plugin.version' for org.apache.maven.plugins:maven-javadoc-plugin is missing. @ org.scijava:pom-scijava:1.126, /var/lib/jenkins/.m2/repository/org/scijava/pom-scijava/1.126/pom-scijava-1.126.pom, line 469, column 12
[WARNING] 
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING] 
[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.
[WARNING] 
Downloading: http://maven.imagej.net/content/groups/public/org/codehaus/mojo/versions-maven-plugin/1.3.1/versions-maven-plugin-1.3.1.jar
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Downloaded: http://maven.imagej.net/content/groups/public/org/codehaus/mojo/versions-maven-plugin/1.3.1/versions-maven-plugin-1.3.1.jar (228 KB at 488.3 KB/sec)
[WARNING] The POM for org.eclipse.m2e:lifecycle-mapping:jar:1.0.0 is missing, no dependency information available
[WARNING] Failed to retrieve plugin descriptor for org.eclipse.m2e:lifecycle-mapping:1.0.0: Plugin org.eclipse.m2e:lifecycle-mapping:1.0.0 or one of its dependencies could not be resolved: Failed to read artifact descriptor for org.eclipse.m2e:lifecycle-mapping:jar:1.0.0
Downloading: http://maven.imagej.net/content/groups/public/org/apache/maven/plugins/maven-metadata.xml
Downloading: http://maven.imagej.net/content/groups/public/org/codehaus/mojo/maven-metadata.xml
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Downloaded: http://maven.imagej.net/content/groups/public/org/codehaus/mojo/maven-metadata.xml (25 KB at 19.8 KB/sec)
Downloading: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-metadata.xml
Downloading: http://repo.maven.apache.org/maven2/org/codehaus/mojo/maven-metadata.xml
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Downloaded: http://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-metadata.xml (13 KB at 68.7 KB/sec)
                      
Downloaded: http://repo.maven.apache.org/maven2/org/codehaus/mojo/maven-metadata.xml (22 KB at 98.6 KB/sec)
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 3.821s
[INFO] Finished at: Tue Feb 18 22:42:42 CST 2014
[INFO] Final Memory: 10M/360M
[INFO] ------------------------------------------------------------------------
[WARNING] The requested profile "sonatype-oss-release" could not be activated because it does not exist.
[ERROR] No plugin found for prefix 'nexus-staging' in the current project and in the plugin groups [org.apache.maven.plugins, org.codehaus.mojo] available from the repositories [local (/var/lib/jenkins/.m2/repository), imagej.public (http://maven.imagej.net/content/groups/public), central (http://repo.maven.apache.org/maven2)] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/NoPluginFoundForPrefixException
Build step 'Execute shell' marked build as failure

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