[ImageJ-builds] Build failed in Jenkins: ImageJ-launcher » master #1105

jenkins at imagej.net jenkins at imagej.net
Wed Feb 12 22:57:13 CST 2014


See <http://jenkins.imagej.net/job/ImageJ-launcher/label=master/1105/changes>

Changes:

[Curtis Rueden] Add short document describing how to debug things

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[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/ImageJ.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/common.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/string-funcs.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/config.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/exe-ico.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/file-funcs.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/java.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/platform.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/splash.c
[DEBUG] gcc -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include -I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux -fno-stack-protector -m32 -c -I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/xalloc.c
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/common.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/java.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/string-funcs.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/config.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/splash.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/exe-ico.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/file-funcs.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/xalloc.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/ImageJ.c'

The ' characters around the executable and arguments are
not part of the command.
[DEBUG] Execute:Java13CommandLauncher: Executing 'gcc' with arguments:
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include'
'-I/home/dscho/fiji/java/linux/jdk1.6.0_24/include/linux'
'-fno-stack-protector'
'-m32'
'-c'
'-I/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include'
'/data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/platform.c'

The ' characters around the executable and arguments are
not part of the command.
[ERROR] In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/common.c:38:0:
[ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
[ERROR] compilation terminated.
[ERROR] In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/splash.c:35:0:
[ERROR] In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/ImageJ.c:70:0:
[ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
[ERROR] [ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
[ERROR] [ERROR] In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/xalloc.c:37:0:
compilation terminated.
[ERROR] In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/string-funcs.c:40:0:
[ERROR] [ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
compilation terminated.
[ERROR] In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/file-funcs.c:35:0:
[ERROR] [ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
compilation terminated.
In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/config.c:1:0:
[ERROR] [ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
[ERROR] compilation terminated.
[ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/java.c:35:0:
[ERROR] [ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
In file included from /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/c/platform.c:36:0:
[ERROR] [ERROR] /data/devel/jenkins/jobs/ImageJ-launcher/workspace/label/master/src/main/include/common.h:42:26: fatal error: glibc-compat.h: No such file or directory
[ERROR] compilation terminated.
[ERROR] compilation terminated.
[ERROR] compilation terminated.
compilation terminated.
[INFO] Core 1 interrupted                                          
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[INFO] Core 9 interrupted                                          

                                                                    
[INFO] 10 files were compiled.
[INFO] 10 files were compiled.
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 9.038s
[INFO] Finished at: Wed Feb 12 22:57:13 CST 2014
[INFO] Final Memory: 16M/172M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal com.github.maven-nar:nar-maven-plugin:3.0.0:nar-compile (default-nar-compile) on project ij-launcher: NAR: Compile failed: gcc failed with return code 1 -> [Help 1]
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal com.github.maven-nar:nar-maven-plugin:3.0.0:nar-compile (default-nar-compile) on project ij-launcher: NAR: Compile failed
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:217)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
	at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
	at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
	at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
	at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
	at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:320)
	at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
	at org.apache.maven.cli.MavenCli.execute(MavenCli.java:537)
	at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:196)
	at org.apache.maven.cli.MavenCli.main(MavenCli.java:141)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
	at java.lang.reflect.Method.invoke(Method.java:597)
	at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:290)
	at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:230)
	at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:409)
	at org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:352)
Caused by: org.apache.maven.plugin.MojoExecutionException: NAR: Compile failed
	at com.github.maven_nar.NarCompileMojo.createLibrary(NarCompileMojo.java:437)
	at com.github.maven_nar.NarCompileMojo.narExecute(NarCompileMojo.java:107)
	at com.github.maven_nar.AbstractNarMojo.execute(AbstractNarMojo.java:322)
	at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101)
	at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209)
	... 19 more
Caused by: gcc failed with return code 1
	at com.github.maven_nar.cpptasks.compiler.CommandLineCompiler.compile(CommandLineCompiler.java:219)
	at com.github.maven_nar.cpptasks.compiler.CommandLineCompilerConfiguration.compile(CommandLineCompilerConfiguration.java:145)
	at com.github.maven_nar.cpptasks.CCTask$Core.run(CCTask.java:1010)
[ERROR] 
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
Build step 'Execute shell' marked build as failure
Archiving artifacts



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