[ImageJ-bugs] [Bug 1034] New: Error when opening TIFF files

[bugzilla at fiji.sc]

http://fiji.sc/bugzilla/show_bug.cgi?id=1034

            Bug ID: 1034
           Summary: Error when opening TIFF files
           Product: Fiji
           Version: unspecified
          Hardware: PC
                OS: Windows
            Status: NEW
          Severity: normal
          Priority: P4
         Component: Plugins
          Assignee: imagej-bugs at imagej.net
          Reporter: johnnyh.2007 at gmail.com
                CC: johnnyh.2007 at gmail.com

With the most recent update of FIJI/ImageJ, I cannot open TIFF files either by
drag and drop or by File>Open...
This is the error message I receive: 

(Fiji Is Just) ImageJ 2.0.0-rc-26/1.49p; Java 1.6.0_24 [64-bit]; Windows 7 6.1;
38MB of 55000MB (<1%)

java.lang.NoClassDefFoundError: Could not initialize class
loci.formats.gui.LegacyQTTools
    at loci.formats.in.PictReader.<init>(PictReader.java:103)
    at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
    at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
    at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
    at java.lang.Class.newInstance0(Class.java:355)
    at java.lang.Class.newInstance(Class.java:308)
    at loci.formats.ImageReader.<init>(ImageReader.java:126)
    at loci.formats.in.FilePatternReader.<init>(FilePatternReader.java:79)
    at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
    at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
    at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
    at java.lang.Class.newInstance0(Class.java:355)
    at java.lang.Class.newInstance(Class.java:308)
    at loci.formats.ImageReader.<init>(ImageReader.java:126)
    at io.scif.bf.BioFormatsFormat.createImageReader(BioFormatsFormat.java:137)
    at
io.scif.bf.BioFormatsFormat.getCachedImageReader(BioFormatsFormat.java:147)
    at
io.scif.bf.BioFormatsFormat.getCachedImageReader(BioFormatsFormat.java:524)
    at io.scif.bf.BioFormatsFormat.access$100(BioFormatsFormat.java:81)
    at io.scif.bf.BioFormatsFormat$Checker.isFormat(BioFormatsFormat.java:361)
    at
io.scif.services.DefaultFormatService.getFormatList(DefaultFormatService.java:331)
    at
io.scif.services.DefaultFormatService.getFormat(DefaultFormatService.java:310)
    at
io.scif.services.DefaultDatasetIOService.canOpen(DefaultDatasetIOService.java:81)
    at io.scif.io.DatasetIOPlugin.supportsOpen(DatasetIOPlugin.java:65)
    at org.scijava.io.DefaultIOService.getOpener(DefaultIOService.java:66)
    at
net.imagej.legacy.plugin.DefaultLegacyOpener.open(DefaultLegacyOpener.java:130)
    at
net.imagej.legacy.DefaultLegacyHooks.interceptFileOpen(DefaultLegacyHooks.java:329)
    at
net.imagej.legacy.DefaultLegacyHooks.interceptRunPlugIn(DefaultLegacyHooks.java:152)
    at ij.IJ.runPlugIn(IJ.java)
    at ij.Executer.runCommand(Executer.java:131)
    at ij.Executer.run(Executer.java:64)
    at java.lang.Thread.run(Thread.java:662)

Information about your version of Java:

  os.arch => amd64
  os.name => Windows 7
  os.version => 6.1
  java.version => 1.6.0_24
  java.vendor => Sun Microsystems Inc.
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.6.0_24-b07
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 19.1-b02
  java.vm.vendor => Sun Microsystems Inc.
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.Win32GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.6
  sun.cpu.endian => little
  sun.desktop => windows
  file.separator => \

The up-to-date check says: REMIND_LATER

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: C:\Users\HEDDLE~1\Fiji.app/java/win64/jdk1.6.0_24//jre
  imagej.dir => C:\Users\HEDDLE~1\Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20150319131059)
Fiji: http://fiji.sc/update/ (last check:20150319162456)
3D ImageJ Suite: http://sites.imagej.net/Tboudier/ (last check:20141208025245)
BigDataViewer: http://sites.imagej.net/Pietzsch/ (last check:20141221100506)
Bio-Formats: http://sites.imagej.net/Bio-Formats/ (last check:20150320212719)
HDF5: http://sites.imagej.net/Ronneber/ (last check:20150214074119)

Files not up-to-date:
  b0038cbf (MODIFIED) 20150323111603 jars/ij-1.49p.jar
  1ad3be0d (LOCAL_ONLY) 20140627205826 jars/jpedalSTD.jar
  1c12f9db (LOCAL_ONLY) 20140825171504 macros/deskew.ijm
  4da741fc (LOCAL_ONLY) 20140502134400 plugins/ColorSegmentation_.jar
  55f1c5c5 (LOCAL_ONLY) 20140502134411 plugins/Hypervolume_Shuffler.class
  a75d3b5e (LOCAL_ONLY) 20140502134407 plugins/Shape_Descriptor1u.class
  c272aa4d (LOCAL_ONLY) 20140502134349 plugins/SpotTrackerX2D_.jar
  5f60d96e (LOCAL_ONLY) 20140502134342 plugins/Watershed_.jar
  f4dea927 (LOCAL_ONLY) 20150108101051 plugins/deskew.ijm

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