[ImageJ-bugs] [Bug 1011] make substack not working after updating to 1.49p

bugzilla at fiji.sc bugzilla at fiji.sc
Sun Mar 1 17:50:41 CST 2015


http://fiji.sc/bugzilla/show_bug.cgi?id=1011

--- Comment #4 from Wayne Rasband <wsr at nih.gov> ---
I get the following exception if I use

   run("Make Substack...", "channels=3")

on a 3 channel, 10 slice hyperstack with "Enable ImageJ2 data structures"
checked in Edit>Options>ImageJ2.

(Fiji Is Just) ImageJ 2.0.0-rc-25/1.49p; Java 1.8.0_25 [64-bit]; Mac OS X
10.10.1; 92MB of 6983MB (1%)

java.lang.NullPointerException
    at
net.imagej.legacy.translate.AbstractDisplayCreator.getDataset(AbstractDisplayCreator.java:76)
    at
net.imagej.legacy.translate.GrayDisplayCreator.grayCase(GrayDisplayCreator.java:159)
    at
net.imagej.legacy.translate.GrayDisplayCreator.makeDisplay(GrayDisplayCreator.java:129)
    at
net.imagej.legacy.translate.AbstractDisplayCreator.createDisplay(AbstractDisplayCreator.java:63)
    at
net.imagej.legacy.translate.DefaultImageTranslator.createDisplay(DefaultImageTranslator.java:100)
    at
net.imagej.legacy.translate.DefaultImageTranslator.createDisplay(DefaultImageTranslator.java:84)
    at
net.imagej.legacy.LegacyImageMap.registerLegacyImage(LegacyImageMap.java:271)
    at
net.imagej.legacy.DefaultLegacyHooks.registerImage(DefaultLegacyHooks.java:177)
    at ij.gui.ImageWindow.show(ImageWindow.java)
    at ij.gui.ImageWindow.<init>(ImageWindow.java:138)
    at ij.gui.StackWindow.<init>(StackWindow.java:28)
    at ij.gui.StackWindow.<init>(StackWindow.java:24)
    at ij.ImagePlus.show(ImagePlus.java:418)
    at ij.ImagePlus.show(ImagePlus.java:393)
    at ij.plugin.SubHyperstackMaker.run(SubHyperstackMaker.java:54)
    at ij.plugin.SubstackMaker.run(SubstackMaker.java:33)
    at ij.IJ.runPlugIn(IJ.java:169)
    at ij.Executer.runCommand(Executer.java:131)
    at ij.Executer.run(Executer.java:61)
    at ij.IJ.run(IJ.java:275)
    at ij.macro.Functions.doRun(Functions.java:591)
    at ij.macro.Functions.doFunction(Functions.java:89)
    at ij.macro.Interpreter.doStatement(Interpreter.java:226)
    at ij.macro.Interpreter.doStatements(Interpreter.java:214)
    at ij.macro.Interpreter.run(Interpreter.java:111)
    at ij.macro.Interpreter.run(Interpreter.java:81)
    at ij.macro.Interpreter.run(Interpreter.java:92)
    at ij.plugin.Macro_Runner.runMacro(Macro_Runner.java:153)
    at ij.IJ.runMacro(IJ.java:116)
    at ij.IJ.runMacro(IJ.java:105)
    at net.imagej.legacy.IJ1Helper.runMacro(IJ1Helper.java:794)
    at net.imagej.legacy.plugin.IJ1MacroEngine.eval(IJ1MacroEngine.java:116)
    at net.imagej.legacy.plugin.IJ1MacroEngine.eval(IJ1MacroEngine.java:160)
    at org.scijava.script.ScriptModule.run(ScriptModule.java:175)
    at org.scijava.module.ModuleRunner.run(ModuleRunner.java:167)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:126)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:65)
    at
org.scijava.thread.DefaultThreadService$2.call(DefaultThreadService.java:164)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)

-- 
You are receiving this mail because:
You are the assignee for the bug.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://imagej.net/pipermail/imagej-bugs/attachments/20150301/9b277bb9/attachment.html>


More information about the Imagej-bugs mailing list