[ImageJ-bugs] [Bug 1126] New: Bio-Formats plug-in doesn't open EasyRatioPro .seq files
bugzilla at fiji.sc
bugzilla at fiji.sc
Wed Jul 29 07:34:28 CDT 2015
http://fiji.sc/bugzilla/show_bug.cgi?id=1126
Bug ID: 1126
Summary: Bio-Formats plug-in doesn't open EasyRatioPro .seq
files
Product: Fiji
Version: unspecified
Hardware: Macintosh
OS: Mac OS
Status: NEW
Severity: normal
Priority: P4
Component: Plugins
Assignee: imagej-bugs at imagej.net
Reporter: nickolai.vysokov at kcl.ac.uk
CC: nickolai.vysokov at kcl.ac.uk
It says here that Bio-Formats should recognise the .seq file:
https://www.openmicroscopy.org/site/support/bio-formats5.1/formats/imagepro-sequence.html
However, when I try to open the files generated by EasyRatioPro software
(http://www.pti-nj.com/products/Fluorescence-Imaging-Systems/EasyRatioPro/EasyRatioPro.html),
it says that the file format is nor recognised. Looking at the contents, it
seems that .seq is just tiff images interspersed with metadata, so should be
openable...
Please let me know if you would like a .seq file or the session .esf file to
reproduce it.
Kind Regards,
Nickolai.
Information about your version of Java:
os.arch => x86_64
os.name => Mac OS X
os.version => 10.10.4
java.version => 1.8.0_40
java.vendor => Oracle Corporation
java.runtime.name => Java(TM) SE Runtime Environment
java.runtime.version => 1.8.0_40-b26
java.vm.name => Java HotSpot(TM) 64-Bit Server VM
java.vm.version => 25.40-b25
java.vm.vendor => Oracle Corporation
java.vm.info => mixed mode
java.awt.graphicsenv => sun.awt.CGraphicsEnvironment
java.specification.name => Java Platform API Specification
java.specification.version => 1.8
sun.cpu.endian => little
sun.desktop => null
file.separator => /
The up-to-date check says: REMIND_LATER
Information relevant to JAVA_HOME related problems:
JAVA_HOME is set to: /Library/Internet
Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/
imagej.dir => /Applications/Fiji.app
Information about the version of each plugin:
Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20150722035527)
Fiji: http://fiji.sc/update/ (last check:20150724205809)
Files not up-to-date:
ddad4022 (MODIFIED) 20140818152715 Contents/Info.plist
1ad3be0d (LOCAL_ONLY) 20130129003808 jars/jpedalSTD.jar
ece0e0cc (LOCAL_ONLY) 20130624204648 macros/toolsets/Magic Montage.txt
88f402c4 (LOCAL_ONLY) 20131111170039 plugins/Exif_Reader.jar
20e2cec7 (LOCAL_ONLY) 20131209110846 plugins/ICTN_1_6_.jar
369b6351 (MODIFIED) 20130916104942 plugins/TrackMate_-2.1.1-SNAPSHOT.jar
5f60d96e (LOCAL_ONLY) 20140108131630 plugins/Watershed_.jar
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