[ImageJ-bugs] [Bug 1117] New: Java 1.8_51 behavior

[bugzilla at fiji.sc]

http://fiji.sc/bugzilla/show_bug.cgi?id=1117

            Bug ID: 1117
           Summary: Java 1.8_51 behavior
           Product: Fiji
           Version: unspecified
          Hardware: Macintosh
                OS: Mac OS
            Status: NEW
          Severity: normal
          Priority: P4
         Component: Plugins
          Assignee: imagej-bugs at imagej.net
          Reporter: glenmac at uw.edu
                CC: glenmac at uw.edu

Hello,
After installing Java 1.8_51 a couple of error messages began popping up.  They
remained with a fresh install of Fiji, and after Fiji updates.
On startup, the Log window displays:
ReferenceError: "importPackage" is not defined in <eval> at line number 1

Using Bio-formats to open a 4-channel stack from OIF or OME formats will repeat
these lines 7 times in the Console window:
Warning:  org.apache.xerces.jaxp.SAXParserImpl$JAXPSAXParser: Property
'http://www.oracle.com/xml/jaxp/properties/entityExpansionLimit' is not
recognized.
Warning:  org.apache.xerces.parsers.SAXParser: Feature
'http://javax.xml.XMLConstants/feature/secure-processing' is not recognized.
Warning:  org.apache.xerces.parsers.SAXParser: Property
'http://javax.xml.XMLConstants/property/accessExternalDTD' is not recognized.
Warning:  org.apache.xerces.parsers.SAXParser: Property
'http://www.oracle.com/xml/jaxp/properties/entityExpansionLimit' is not
recognized.
the files open and all metadata seems present.  

Regards,
Glen

Information about your version of Java:

  os.arch => x86_64
  os.name => Mac OS X
  os.version => 10.9.5
  java.version => 1.8.0_51
  java.vendor => Oracle Corporation
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.8.0_51-b16
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 25.51-b03
  java.vm.vendor => Oracle Corporation
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.CGraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.8
  sun.cpu.endian => little
  sun.desktop => null
  file.separator => /

The up-to-date check says: UP_TO_DATE

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to:
/Library/Java/JavaVirtualMachines/jdk1.8.0_51.jdk/Contents/Home//jre
  imagej.dir => /Applications/Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20150715140840)
Fiji: http://fiji.sc/update/ (last check:20150714092641)
3D ImageJ Suite: http://sites.imagej.net/Tboudier/ (last check:20150630212022)
BAR: http://sites.imagej.net/Tiago/ (last check:20150604074025)
Bio-Formats: http://sites.imagej.net/Bio-Formats/ (last check:20150716182651)
BioVoxxel: http://sites.imagej.net/BioVoxxel/ (last check:20150702033207)
ClearVolume: http://sites.imagej.net/ClearVolume/ (last check:20150703031607)
DiameterJ: http://sites.imagej.net/DiameterJ/ (last check:20150702073801)
FFMPEG: http://fiji.sc/~schindelin/ffmpeg-plugins/ (last check:20130606082449)
HDF5: http://sites.imagej.net/Ronneber/ (last check:20150214044119)
IMCF Uni Basel: http://sites.imagej.net/UniBas-IMCF/ (last
check:20150628105511)
Morphology: http://sites.imagej.net/Landini/ (last check:20140723075558)
MOSAIC ToolSuite:
http://mosaic.mpi-cbg.de/Downloads/update/Fiji/MosaicToolsuite/ (last
check:20150710085613)
NucleusJ: http://sites.imagej.net/PouletAxel/ (last check:20141101023602)
OMERO 5.1: http://sites.imagej.net/OMERO-5.1/ (last check:20150609144541)
PTBIOP: http://biop.epfl.ch/Fiji-Update/ (last check:20150710012028)
ScientiFig: http://sites.imagej.net/Aigouy/ (last check:20150326043209)
Stowers: http://research.stowers.org/imagejplugins/updates/ (last
check:20150602083540)

Files not up-to-date:
  ee60586c (MODIFIED) 20150716085254 Contents/Info.plist
  4325d004 (LOCAL_ONLY) 20150716085950 plugins/jars/j3dutils.jar

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