ImageJ Hackathons | | | |
2007 Summer | HHMI Janelia
Ashburn, VA, USA |
Albert Cardona
bene51
jefferis
Hanchuan Peng
Johannes Schindelin
Stephan Preibisch
Stephan Saalfeld
rasband
Arnim Jenett
Julie Simpson
Torsten Rohlfing
Yuriy Mishchenko
| Neuroscience |
2008 Apr 21 -
2008 Apr 30 | MPI-CBG
Dresden, Germany |
Albert Cardona
bene51
Cornelius Sicker
Daniel James White
frederikfly
Jean-Yves Tinevez
Johannes Schindelin
Mark Hiner
Stephan Preibisch
Stephan Saalfeld
Pavel Tomancak
| Fiji |
2008 Dec 8 -
2008 Dec 13 | INI
Zürich, Switzerland | ? | Fiji |
2009 Mar 23 -
2009 Apr 03 | MPI-CBG
Dresden, Germany |
Johannes Schindelin
Albert Cardona
Jean-Yves Tinevez
bene51
Ignacio Arganda-Carreras
Daniel James White
Mark Hiner
Pavel Tomancak
Stephan Preibisch
Stephan Saalfeld
Raju Tomer
Misha Kudryashev
| Segmentation |
2010 Mar 14 -
2010 Mar 27 | EMBL
Heidelberg, Germany |
Albert Cardona
Stephan Saalfeld
bene51
cmci
Curtis Rueden
Johannes Schindelin
Ignacio Arganda-Carreras
Larry Lindsey
Mark Hiner
Stephan Preibisch
Grant Harris
vkaynig
| Fiji |
2010 Oct 12 -
2010 Oct 23 | LBNL
Berkeley CA, USA |
frederikfly
Johannes Schindelin
| Running Micro-Manager inside Fiji |
2011 Jan 27 -
2011 Feb 13 | WID
Madison, WI, USA |
Ignacio Arganda-Carreras
Paul Barber
Albert Cardona
Barry DeZonia
Arthur Edelstein
Adam Fraser
frederikfly
Aivar Grislis
Grant Harris
hinerm
Luis Ibanez
LeeKamentsky
Larry Lindsey
Melissa Linkert
Mark Hiner
Tobias Pietzsch
Stephan Preibisch
Curtis Rueden
Stephan Saalfeld
Johannes Schindelin
bene51
Pavel Tomancak
Kevin Eliceiri
Rick Lentz
Mark Rowley
| Multidimensional visualization |
2011 Dec 9 -
2011 Dec 19 | MPI-CBG
Dresden, Germany |
jburel
Stephane Dallongeville
Barry DeZonia
Christian Dietz
Michael Doube
Fabrice de Chaumont
frederikfly
Martin Horn
Daniel James White
tomka
alex-krull
Melissa Linkert
Mark Hiner
Moore
Tobias Pietzsch
Stephan Preibisch
Curtis Rueden
Johannes Schindelin
bene51
Pavel Tomancak
Peter Gabriel Pitrone
Kevin Eliceiri
Fernando Carrilo, Jiri Matas, Jurgen Mayer
| Interoperability |
2012 Oct | Universität Konstanz
Konstanz, Germany |
Martin Horn
Christian Dietz
Tobias Pietzsch
Johannes Schindelin
| KNIME+Fiji |
2013 Jan 22 -
2013 Jan 25 | LOCI
Madison, WI, USA |
thewtex
Curtis Rueden
Johannes Schindelin
hinerm
| SCIFIO ImageIO plugin
|
2013 Apr 14 -
2013 Apr 18 | LOCI
Madison, WI, USA |
Ignacio Arganda-Carreras
Johannes Schindelin
Curtis Rueden
| Trainable Weka Segmentation |
2013 Apr 27 -
2013 May 3 | LOCI
Madison, WI, USA |
Stephan Preibisch
Tobias Pietzsch
Curtis Rueden
Johannes Schindelin
Barry DeZonia
hinerm
Aivar Grislis
| ImgLib2 |
2013 Sep 9 -
2013 Sep 13 | Institut Pasteur
Paris France |
Tobias Pietzsch
Jean-Yves Tinevez
| MaMuT, BigDataViewer |
2013 Nov 14 -
2013 Nov 27 | LOCI
Madison, WI, USA |
Christian Dietz
Johannes Schindelin
Curtis Rueden
| KNIME+ImageJ |
2014 Mar 4 -
2014 Mar 13 | Universität Konstanz
Konstanz, Germany |
Curtis Rueden
Johannes Schindelin
Christian Dietz
Martin Horn
| ImageJ Ops |- valign="top" | |
2014 Mar 20 -
2014 Mar 21 | LOCI
Madison, WI, USA |
jburel
Peter Walczysko
Curtis Rueden
| ImageJ-OMERO
|
2014 Jul 7 -
2014 Jul 10 | LOCI
Madison, WI, USA |
Mark Tsuchida
Chris Weisiger
Johannes Schindelin
stuyvenberg
Curtis Rueden
hinerm
| Micro-Manager and OpenSPIM |
2014 Sep 14 -
2014 Sep 18 | LOCI
Madison, WI, USA |
Christian Dietz
bnorthan
hinerm
Curtis Rueden
apal4
Yuming Liu
Alison Walter
Ginger Pocock
| ImageJ Ops + KNIME |
2014 Oct 13 -
2014 Oct 17 | LOCI
Madison, WI, USA |
Tobias Pietzsch
Stephan Preibisch
Stephan Saalfeld
Johannes Schindelin
Curtis Rueden
hinerm
| ImgLib2 |
2015 Jan 19 -
2015 Jan 27 | FREIRÄUME
Konstanz, Germany |
Christian Dietz
Curtis Rueden
hinerm
LeeKamentsky
Tobias Pietzsch
Florian Jug
Johannes Schindelin
Ignacio Arganda-Carreras
gab1one
Daniel Seebacher
kmader
Andreas Graumann
Jonathan Hale
tibuch
Patrick Winter
Andreas Burger
Tobias Kötter
| ImageJ Ops + KNIME + CellProfiler + more |
2015 Apr 12 -
2015 Apr 17 | HHMI Janelia
Ashburn, VA, USA |
Stephan Preibisch
Tobias Pietzsch
Stephan Saalfeld
Pavel Tomancak
| Multiview-Reconstruction and BigDataViewer |
2015 June 29 -
2015 July 3 | BIMSB/MDC
Berlin, Germany |
Stephan Preibisch
Christian Dietz
Mario Emmenlauer
Stephan Janosch
| Parallelization of Multiview-Reconstruction
and integration with ImageJ Ops & KNIME |
2015 Jul 27 -
2015 Jul 31 | HHMI Janelia
Ashburn, VA, USA |
Stephan Saalfeld
Curtis Rueden
hinerm
Tobias Pietzsch
tomka
Burkhard Höckendorf
Fernando Amat
Phillip Keller
| SCIFIO performance and generality |
2015 Sep 05 -
2015 Sep 15 | WID + LOCI
Madison, WI, USA |
Curtis Rueden
hinerm
Christian Dietz
Tobias Pietzsch
Stephan Saalfeld
bnorthan
Florian Jug
thewtex
Jay Warrick
Tiago Ferreira
biovoxxel
etarena
Alison Walter
LeonYang5114
Yuming Liu
Guneet Singh Mehta
Marcel Austenfeld
Karl Bellve
Alex Rigano
Pariksheet Nanda
Mark Tsuchida
Chris Weisiger
| ImageJ2 Learnathon + ImageJ Ops |
2016 Jan 12 -
2016 Jan 22 | KNIME Konstanz Regional Office
Konstanz, Germany |
Christian Dietz
Curtis Rueden
Mark Hiner
Martin Horn
Tobias Pietzsch
Florian Jug
Loic Royer
skalarproduktraum
Robert Haase
Stefan Helfrich
kmader
Kyle Harrington
Jan Eglinger
Thomas Re
tibuch
Jonathan Hale
Daniel Seebacher
Patrick Winter
Alexander Fillbrunn
Nico Hoffmann
Timo Sachsenberg
Julianus Pfeuffer
Temesgen H. Dadi
| KNIME Image Processing |
2016 Jun 19 -
2016 Jun 28 | HHMI Janelia
Ashburn, VA, USA |
Stephan Saalfeld
Tobias Pietzsch
Curtis Rueden
Christian Dietz
Kyle Harrington
| Metadata rich images |
2016 Jul 5 -
2016 Jul 14 | KNIME Konstanz Regional Office
Konstanz, Germany |
Christian Dietz
Patrick Winter
Tobias Pietzsch
skalarproduktraum
Curtis Rueden
Martin Horn
Stefan Helfrich
Kyle Harrington
Richard Domander
kmader
Andreas Burger
Marcel Wiedenmann
Simon Schmid
Joshy Cyriac
Jonathan Hale
Alexander Fillbrunn
Jan Eglinger
tibuch
Stefano Woerner
Cyril Mongis
hoerldavid
Nico Hoffmann
| KNIME Image Processing + 3D viz |
2016 Dec 6 -
2016 Dec 16 | MPI-CBG
Dresden, Germany |
Florian Jug
Tobias Pietzsch
Pavel Tomancak
Curtis Rueden
Stephan Saalfeld
hanslovsky
kephale
rimadoma
tinevez
dietzc
Patrick Winter
skalarproduktraum
Loic Royer
Robert Haase
hkmoon
tibuch
Marcel Wiedenmann
hoerldavid
milkyklim
maarzt
Vladimír Ulman
Carsten Haubold
Jonas Massa
| Fiji & KNIP |
2017 Feb 21 -
2017 Feb 26 | LOCI
Madison, WI, USA |
Tobias Pietzsch
Stephan Saalfeld
Christian Dietz
Curtis Rueden
Alison Walter
| ImgLib2 |
2017 Jun 7 -
2017 Jun 14 | LOCI
Madison, WI, USA |
dietzc
Curtis Rueden
| ImageJ Ops |
2017 Sep 20 -
2017 Sep 29 | KNIME Konstanz Regional Office
Konstanz, Germany |
dietzc
maarzt
tibuch
imagejan
gab1one
Alexander Fillbrunn
Jon Fuller
Jonathan Hale
Carsten Haubold
stelfrich
Martin Horn
fjug
David Kolb
milkyklim
kmader
Julianus Pfeuffer
tpietzsch
Mangal Prakash
StephanPreibisch
Jonas Probst
René Rahn
ctrueden
Simon Schmid
Deborah Schmidt
Vladimír Ulman
Marcel Wiedenmann
Benjamin Wilhelm
Patrick Winter
| KNIME Image Processing, ImageJ Ops, Ilastik |
2017 Oct 17 -
2017 Oct 18 | UConn Health
Farmington, CT, USA |
jcschaff
Curtis Rueden
| Virtual Cell + ImageJ |
2017 Dec 4 -
2017 Dec 15 | MPI-CBG
Dresden, Germany |
Florian Jug
Tobias Pietzsch
Pavel Tomancak
Curtis Rueden
hanslovsky
kephale
rimadoma
tinevez
dietzc
skalarproduktraum
Loic Royer
Robert Haase
hkmoon
tibuch
Marcel Wiedenmann
hoerldavid
milkyklim
maarzt
Vladimír Ulman
Carsten Haubold
Pbainar
Alison Walter
| Fiji & KNIP |
2018 Apr 22 -
2018 May 2 | University of Idaho
Moscow, ID, USA |
Kyle Harrington
Stephan Saalfeld
Christian Dietz
Curtis Rueden
Matthias Arzt
Tobias Pietzsch
Loic Royer
Brian Northan
skalarproduktraum
Mark Tsuchida
Robert Wiese
| SciView |
2018 May 16 -
2018 May 18 | Galvanize
San Francisco, CA, USA |
Dan Toloudis (AICS)
Dyche Mullins (UCSF)
Lisa Harrylock (AICS)
Tom Goddard (UCSF)
Molly Maleckar (AICS)
Tom Ferrin (UCSF)
Graham Johnson (AICS)
Samuel Lord (UCSF/HHMI)
Basu Chaudhuri (AICS)
Ambrose Carr (CZI)
Megan Riel-Megan (AICS)
Jeremy Freeman (CZI)
Dave Williams (AICS)
Nicholas Sofroniew (CZI)
<a class="person" href="https://github.com/Curtis Rueden
">Curtis Rueden
</a>
Arne Bakker (CZI)
Syuan-Ming Guo (CZ Biohub)
Andréa Clavijo (CZI)
Deep Ganguli (CZI)
Shalin Mehta (CZ Biohub)
Tony Tung (CZI)
Sarah Kefayati (CZ Biohub)
Anitha Krishnan (CZ Biohub)
<a class="person" href="https://github.com/Allen Goodman
">Allen Goodman
</a>
Norah Klintberg (CZ Biohub)
Eric Perlman (Johns Hopkins)
Oana Carja (CZ Biohub) Benny Lin (U Texas Austin)
Jeremy Maitlen-Shephard (Google)
| Bioimage Analysis in JavaScript, Python + Java |
2018 Oct 31 -
2018 Nov 06 | LOCI
Madison, WI, USA |
Christian Dietz
Tobias Pietzsch
Mark Tsuchida
Curtis Rueden
| ImgLib2, Micro-Manager |
2018 Dec 09 -
2018 Dec 14 | MPI-CBG
Dresden, Germany |
Curtis Rueden
Carsten Haubold
Christian Dietz
gab1one
Benjamin Wilhelm
Marcel Wiedenmann
maarzt
Deborah Schmidt
Tobias Pietzsch
skalarproduktraum
Gabriella Turek
| Hacking |
2019 Jan 17 -
2019 Jan 29 | IT4Innovations
Ostrava, Czech Republic |
Florian Jug
Tobias Pietzsch
Pavel Tomancak
dietzc
tibuch
Marcel Wiedenmann
maarzt
Vladimír Ulman
Pbainar
Alison Walter
gab1one
David Kolb
Mangal Prakash
Deborah Schmidt
Benjamin Wilhelm
John Bogovic
Nicolas Chiaruttini
Jana Klímová
Jan Kožusznik
Michal Krumnikl
Manan Lalit
Emil Melnikov
Pavel Moravec
Václav Svatoň
Christian Tischer
Gabriella Turek
Tomas Vicar
Marwan Zouinkhi
| Parallelization and HPC |
2019 Sep 18 -
2019 Sep 24 | KNIME Konstanz Regional Office
Konstanz, Germany |
Michael Crusoe
Stefan Verhoeven
ctrueden
dietzc
tpietzsch
Marcel Wiedenmann
Daniel Bogenrieder
Deborah Schmidt
Benjamin Wilhelm
Adrian Nembach
Laurent Thomas
Kefang Ding
frankprotopapa
Christian Albrecht
gab1one
David Kolb
| KNIME |
2019 Dec 9 -
2019 Dec 18 | CSB Dresden
Dresden, Germany |
hanslovsky
ctrueden
tpietzsch
skalarproduktraum
tibuch
fjug
thewtex
stelfrich
haesleinhuepf
Marcel Wiedenmann
Emil Nelnikov
Wei Ouyang
Vladimír Ulman
tomancak
Uwe Schmidt
Deborah Schmidt
Benjamin Wilhelm
Nicolas Chiaruttini
Mangal Prakash
Maksim Novikov
Christian Tischer
Manan Lalit
Bob Hanson
Adrian Wolny
Gabriella Turek
Tomas Vicar
David Ackerman
Lars Grüter
Mats Moskopp
Arrate Muñoz Barrutia
| Python+Fiji |
2020 Aug 10 -
2020 Aug 21 | IT4Innovations
Ostrava, Czech Republic |
Florian Jug
Pavel Tomancak
Jan Kožusznik
Michal Krumnikl
Pavel Moravec
Václav Svatoň
| Parallel Macro/Scripts and OpenMPI Plugins |
| | | |