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Citing

    This page describes how to ““cite”” SciJava projects.

    • For information on who ““contributes”” to these projects, see Contributors.
    • For information on who ““maintains”” these projects, see Governance.
    • For information on how ImageJ projects are ““funded””, see Funding.

    == Guidelines ==

    We ask users to cite:

    1. Any specific publications of plugins used.
    2. The general paper of ImageJ distribution(s) used—e.g., if you used Fiji, cite the Fiji paper.
    3. The general ImageJ paper.

    If journal reference limits interfere, the plugin-specific publications should take precedence.

    In general, please cite these projects—their long-term future depends on it!

    Thank you for your support.

    Publications to cite

    Logo

    Project

    Citation

    Core projects

    ImageJ2

    Rueden, C. T.; Schindelin, J. & Hiner, M. C. et al. (2017), "ImageJ2: ImageJ for the next generation of scientific image data", *BMC Bioinformatics* **18:529**, PMID 29187165, doi:10.1186/s12859-017-1934-z (on Google Scholar)

    ImageJ 1.x

    Distributions of ImageJ

    Fiji

    Schindelin, J.; Arganda-Carreras, I. & Frise, E. et al. (2012), "Fiji: an open-source platform for biological-image analysis", *Nature methods* **9(7)**: 676-682, PMID 22743772, doi:10.1038/nmeth.2019 (on Google Scholar).

    BoneJ

    Doube, M.; Kłosowski, M. M. & Arganda-Carreras, I. et al. (2010), "BoneJ: Free and extensible bone image analysis in ImageJ", *Bone* **47(6)**: 1076-1079, PMID 20817052 (on Google Scholar).

    Bio7

    Austenfeld, M. & Beyschlag, W. (2012), "A Graphical User Interface for R in a Rich Client Platform for Ecological Modeling.", *Journal of Statistical Software* **49(4)**: 1-19 (on Google Scholar).

    Supporting libraries

    ImgLib2

    Pietzsch, T.; Preibisch, S. & Tomancak, P. et al. (2012), "ImgLib2—generic image processing in Java", *Bioinformatics* **28(22)**: 3009-3011, PMID 22962343 (on Google Scholar).

    SciJava Common

    Rueden, C., Schindelin, J., Hiner, M. & Eliceiri, K. (2016). SciJava Common [Software]. <href="https://scijava.org/">https://scijava.org/</a>.

    SCIFIO

    Hiner, M.C.; Rueden, C.T. & Eliceiri, K.W. (2016 Dec 7), "SCIFIO: an extensible framework to support scientific image formats.", *BMC Bioinformatics* **17(1)**: 521, PMID 27927161, doi:10.1186/s12859-016-1383-0 (on Google Scholar).

    ImageJ Ops

    Rueden, C., Dietz, C., Horn, M., Schindelin, J., Northan, B., Berthold, M. & Eliceiri, K. (2016). ImageJ Ops [Software]. https://imagej.net/Ops.

    See the list of citable software and publications using Fiji for additional citation information.